@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XW84: (2017-12-29 )
MEHTWKIGNVEIPNRVVVAPMAGITNSAFRVTVKEFGAGLVVCEMISDQGIHFRNKKTLEMLHIEETEHPLSLQIFGGNKDSLVEAAQFVEENTAADIIDINMGCPVNKVIKAEAGAKWLLDPEKVYEMVQAVSSAVNIPVTIKMRIGWDEEHVFAVENALAAQSAGASAIAMHGRTRVQMYEGKADWEVLKEVKKHLTIPFMGNGDVKTPEDAKWMLDYVGADGVMIGRAALGNPWMIHRTQHYLETGELIPEPTPAEKIATAKLHLQRLADLKGEKVACREFRTHAAYYLKGIPRAAKVKVAINQTEKQQEINDLLDQFVEKAEKVLLKQTL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_A_3(3B0P)
DUSAL_THET8
[Raw transfer]




FMN_A_5(1VHN)
?
[Raw transfer]




EDO_A_5(4BFA)
DUSC_ECOLI
[Raw transfer]




1 PsiBlast_PDB 95.6933%-111 - C1 -1VHN 6.5 ?
72 HHSearch 95.1334%-110 - C1 -1VHN - ? -
63 Fugue 74.6633% 19 - C1 -1VHN - ? -
64 Fugue 71.2727% -18 - C1 -3B0P - DUSAL_THET8 -
76 HHSearch 70.1227% -7 - C1 -3B0P - DUSAL_THET8 -
75 HHSearch 68.4427% -10 - C1 -3B0U - DUSAL_THET8 -
78 HHSearch 63.4022% -9 - C1 -4XP7 - DUS2L_HUMAN -
2 PsiBlast_PDB 60.7933% -39 - C1 -3B0P 9.6 DUSAL_THET8
22 PsiBlast_CBE 60.4633% -39 - C1 -3B0P - DUSAL_THET8 -
11 PsiBlast_PDB 58.5626% -1 - C1 -4XP7 - DUS2L_HUMAN -
6 PsiBlast_PDB 58.5631% -40 - C1 -3B0V - DUSAL_THET8 -
77 HHSearch 58.5422% -10 - C1 -4WFS - DUS2L_HUMAN -
73 HHSearch 58.0826% 20 - C1 -4BFA - DUSC_ECOLI -
65 Fugue 57.9627% 10 - C1 -4BFA - DUSC_ECOLI -
21 PsiBlast_CBE 57.7733% -32 - C1 -3B0U - DUSAL_THET8 -
3 PsiBlast_PDB 57.3533% -32 - C1 -3B0U - DUSAL_THET8 -
4 PsiBlast_PDB 57.2432% 12 - C1 -3W9Z - DUSC_ECOLI -
9 PsiBlast_PDB 57.0431% 5 - C1 -4BF9 - DUSC_ECOLI -
74 HHSearch 57.0126% 20 - C1 -4YCO - DUSC_ECOLI -
8 PsiBlast_PDB 56.3232% 17 - C1 -4YCP - DUSC_ECOLI -