@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XZD4: (2018-01-14 )
MSSVVVVGTQWGDEGKGKITDFLSENAEVIARYQGGDNAGHTIKFNGVTYKLHLIPSGIFYKDKISVIGNGVVVNPKSLVKELAYLHEKGVETSNLRISDRAHVILPYHIKLDQLQEDAKGENKIGTTIKGIGPAYMDKAARVGIRIADLLDKEIFEERLRLNLDDKNRQFVKMFDSEPLDFDDIFEEYYEYGQQIKQYVTDTSVILNDALDAGKRVLFEGAQGVMLDIDQGTYPFVTSSNPVAGGVTIGSGVGPSKINKVVGVCKAYTSRVGDGPFPTELFDETGEQIREVGREYGTTTGRPRRVGWFDSVVMRHSKRVSGITNLSLNSIDVLSGLETVKICTAYELDGELIYHYPASLKELNRCKPIYEELPGWSEDITGCKTLAELPENARNYVRRISELVGVRISTFSVGPDRTQTNILESVWAQI

Atome Classification :

(52 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IMO_A_5(1LNY)
PURA1_MOUSE
[Raw transfer]




IMO_A_3(1LON)
PURA1_MOUSE
[Raw transfer]




PGS_A_5(1NHT)
PURA_ECOLI
[Raw transfer]




IMO_B_8(1LNY)
PURA1_MOUSE
[Raw transfer]




DOI_A_3(2DGN)
PURA1_MOUSE
[Raw transfer]




RPD_A_5(1QF4)
PURA_ECOLI
[Raw transfer]




PGS_A_5(1KSZ)
PURA_ECOLI
[Raw transfer]




DOI_A_3(2GCQ)
PURA_ECOLI
[Raw transfer]




2SA_A_5(1MEZ)
PURA1_MOUSE
[Raw transfer]




RPL_A_5(1QF5)
PURA_ECOLI
[Raw transfer]




RPL_A_5(1QF5)
PURA_ECOLI
[Raw transfer]




RPL_A_5(1QF5)
PURA_ECOLI
[Raw transfer]




IMP_C_3(1KJX)
PURA_ECOLI
[Raw transfer]




IMP_A_8(1IWE)
PURA1_MOUSE
[Raw transfer]




AMP_A_3(4M9D)
PURA_BACAN
[Raw transfer]




AMP_B_8(4M9D)
PURA_BACAN
[Raw transfer]




IMP_E_5(1KKB)
PURA_ECOLI
[Raw transfer]




AMP_A_4(1MF0)
PURA1_MOUSE
[Raw transfer]




IMP_A_5(1KKF)
PURA_ECOLI
[Raw transfer]




AMP_E_5(1MF1)
PURA1_MOUSE
[Raw transfer]




AMP_C_3(1SON)
PURA_ECOLI
[Raw transfer]




IMP_B_6(1IWE)
PURA1_MOUSE
[Raw transfer]




H5P_A_6(1SOO)
PURA_ECOLI
[Raw transfer]




GCP_A_3(1HOP)
PURA_ECOLI
[Raw transfer]




GDP_D_4(1DJ3)
PURA_WHEAT
[Raw transfer]




GCP_B_4(1HOP)
PURA_ECOLI
[Raw transfer]




GDP_D_4(1DJ3)
PURA_WHEAT
[Raw transfer]




GDP_A_6(1P9B)
PURA_PLAFA
[Raw transfer]




GDP_A_6(1P9B)
PURA_PLAFA
[Raw transfer]




GDP_A_5(1CG0)
PURA_ECOLI
[Raw transfer]




GDP_A_6(1GIN)
PURA_ECOLI
[Raw transfer]




GDP_A_4(2GCQ)
PURA_ECOLI
[Raw transfer]




GDP_C_3(1DJ3)
PURA_WHEAT
[Raw transfer]




GDP_A_6(1GIM)
PURA_ECOLI
[Raw transfer]




GPX_A_4(1CH8)
PURA_ECOLI
[Raw transfer]




GDP_A_4(1CIB)
PURA_ECOLI
[Raw transfer]




GDP_A_4(1JUY)
PURA_ECOLI
[Raw transfer]




GTP_C_3(1LOO)
PURA1_MOUSE
[Raw transfer]




GDP_D_4(1DJ2)
PURA_ARATH
[Raw transfer]




GDP_A_4(1CG4)
PURA_ECOLI
[Raw transfer]




DPO_A_3(1KKF)
PURA_ECOLI
[Raw transfer]




GDP_A_5(1CG1)
PURA_ECOLI
[Raw transfer]




GDP_A_5(1CG3)
PURA_ECOLI
[Raw transfer]




GDP_C_3(1DJ2)
PURA_ARATH
[Raw transfer]




GNH_A_3(1HOO)
PURA_ECOLI
[Raw transfer]




GDP_A_2(2V40)
PURA2_HUMAN
[Raw transfer]




GNH_A_3(1HON)
PURA_ECOLI
[Raw transfer]




GDP_A_2(2V40)
PURA2_HUMAN
[Raw transfer]




HAD_C_3(1KKB)
PURA_ECOLI
[Raw transfer]




CIT_A_2(3R7T)
PURA_CAMJE
[Raw transfer]




65 HHSearch 96.8475% -77 - C10 -4M9D 6.6 PURA_BACAN
1 PsiBlast_PDB 93.7173% -81 - C10 -4M0G - PURA_BACAN -
2 PsiBlast_PDB 93.1573% -71 - C10 -4M9D 6.6 PURA_BACAN
76 HHSearch 81.1446% -77 - C10 -3R7T 3.3 PURA_CAMJE
71 HHSearch 74.5545% -11 - C10 -5I34 - ? -
22 PsiBlast_CBE 74.4449% -9 - C10 -1HOP 5.4 PURA_ECOLI
67 HHSearch 74.4247% -8 - C10 -3HID - PURA_YERPE -
69 HHSearch 74.1047% -10 - C10 -3UE9 - PURA_BURTA -
7 PsiBlast_PDB 74.0149% 0 - C10 -1CH8 7.1 PURA_ECOLI
17 PsiBlast_PDB 74.0049% -2 - C10 -1GIM 7.6 PURA_ECOLI
28 PsiBlast_CBE 73.7847% -9 - C10 -3HID - PURA_YERPE -
26 PsiBlast_CBE 73.7048% -1 - C10 -1CG4 7.4 PURA_ECOLI
18 PsiBlast_PDB 73.4949% -4 - C10 -1GIN 6.8 PURA_ECOLI
13 PsiBlast_PDB 73.4849% -4 - C10 -1SOO 5.2 PURA_ECOLI
66 HHSearch 73.3749% -2 * C10 *1QF5 7.0 PURA_ECOLI
9 PsiBlast_PDB 73.2649% -2 - C10 -1QF5 7.0 PURA_ECOLI
5 PsiBlast_PDB 73.2449% 2 - C10 -1KKF 7.2 PURA_ECOLI
25 PsiBlast_CBE 73.1948% 0 - C10 -1CG1 6.9 PURA_ECOLI
16 PsiBlast_PDB 73.0949% -5 - C10 -1HOO 6.7 PURA_ECOLI
23 PsiBlast_CBE 73.0049% -11 - C10 -1HOP 5.6 PURA_ECOLI
4 PsiBlast_PDB 73.0049% -2 - C10 -1KKB 6.6 PURA_ECOLI
10 PsiBlast_PDB 72.9849% 1 - C10 -1CIB 6.7 PURA_ECOLI
12 PsiBlast_PDB 72.9549% -4 - C10 -1SON 5.4 PURA_ECOLI
27 PsiBlast_CBE 72.7648% 0 - C10 -1CG3 7.3 PURA_ECOLI
3 PsiBlast_PDB 72.6849% -0 - C10 -1KJX 5.5 PURA_ECOLI
11 PsiBlast_PDB 72.5849% 1 - C10 -2GCQ 8.5 PURA_ECOLI
6 PsiBlast_PDB 72.5449% -1 - C10 -1CG0 7.5 PURA_ECOLI
8 PsiBlast_PDB 72.4949% 1 - C10 -1QF4 7.4 PURA_ECOLI
20 PsiBlast_PDB 72.4349% -2 - C10 -1NHT 6.8 PURA_ECOLI
21 PsiBlast_CBE 72.4049% -1 - C10 -1JUY 7.7 PURA_ECOLI
19 PsiBlast_PDB 72.3149% -2 - C10 -1KSZ 6.5 PURA_ECOLI
24 PsiBlast_CBE 72.2449% -6 - C10 -1HON 6.1 PURA_ECOLI
74 HHSearch 71.3743% -5 - C10 -2V40 5.6 PURA2_HUMAN
46 PsiBlast_CBE 71.2243% -6 - C10 -1IWE 5.3 PURA1_MOUSE
38 PsiBlast_CBE 70.9643% -6 - C10 -2DGN 7.8 PURA1_MOUSE
37 PsiBlast_CBE 70.9542% -9 - C10 -2V40 5.6 PURA2_HUMAN
47 PsiBlast_CBE 70.4843% -2 - C10 -1IWE 6.2 PURA1_MOUSE
55 Fugue 70.3748% 14 - C10 -1QF5 7.0 PURA_ECOLI
42 PsiBlast_CBE 70.2743% -4 - C10 -1LOO 5.6 PURA1_MOUSE
45 PsiBlast_CBE 70.2443% -2 - C10 -1LNY 8.6 PURA1_MOUSE
43 PsiBlast_CBE 70.0143% -4 - C10 -1LON 8.9 PURA1_MOUSE
40 PsiBlast_CBE 70.0143% -4 - C10 -1MF0 4.0 PURA1_MOUSE
44 PsiBlast_CBE 69.8943% -3 - C10 -1LNY 8.7 PURA1_MOUSE
39 PsiBlast_CBE 69.8243% -2 - C10 -1MF1 5.7 PURA1_MOUSE
48 PsiBlast_CBE 69.7441% 9 - C10 -1P9B 6.8 PURA_PLAFA
77 HHSearch 68.9241% 13 - C10 -1P9B 6.8 PURA_PLAFA
41 PsiBlast_CBE 68.9243% -3 - C10 -1MEZ 7.1 PURA1_MOUSE
34 PsiBlast_CBE 68.2145% 5 - C10 -1DJ2 6.2 PURA_ARATH
70 HHSearch 67.6142% 2 - C10 -1DJ3 6.5 PURA_WHEAT
33 PsiBlast_CBE 67.5945% 9 - C10 -1DJ2 5.8 PURA_ARATH
35 PsiBlast_CBE 65.8443% 3 - C10 -1DJ3 6.5 PURA_WHEAT
36 PsiBlast_CBE 65.8143% 2 - C10 -1DJ3 6.1 PURA_WHEAT