@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XZN0: (2018-01-15 )
MMKKDAKIYVAGHRGMVGSAIVRELNRQGYNNIITRTHKELDLCRQDQVEEFFAEEKPDYVFLAAAKVGGIVANQSALADFMYDNMILEMNVIHSAWKNGCKKLQFLGSSCIYPRMAPQPMPESCLLTSELEKTNEAYALAKISGLKYCEFLNKQYGTDYISVMPTNLYGPNDNYHPTHSHVLPALIRRFHEAKEAGLPTVTCWGDGSPLREFLYVDDFANLCVFLMNNYSGDETVNAGTGKELSIKELTEIVAKIIGYEGEILWDTSKPNGTPRKLLDVSKATKLGWTYKTELEDGIRLSYEDFLNNPMRAER

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_A_2(1E7Q)
FCL_ECOLI
[Raw transfer]



NAP_C_3(1FXS)
FCL_ECOLI
[Raw transfer]



NAP_A_2(1E6U)
FCL_ECOLI
[Raw transfer]



NAP_A_2(1E6U)
FCL_ECOLI
[Raw transfer]



NDP_C_3(1BWS)
FCL_ECOLI
[Raw transfer]



NDP_C_3(1BSV)
FCL_ECOLI
[Raw transfer]



NDP_C_3(1BSV)
FCL_ECOLI
[Raw transfer]



NAP_A_2(1E7R)
FCL_ECOLI
[Raw transfer]



NAP_A_2(1E7S)
FCL_ECOLI
[Raw transfer]



GDP_D_12(4B8Z)
FCL_HUMAN
[Raw transfer]



GDP_A_6(4B8Z)
FCL_HUMAN
[Raw transfer]
47 HHSearch 94.6154% -66 - C1 -1BSV 8.8 FCL_ECOLI
50 HHSearch 94.1254% -61 - C1 -1E6U 9.0 FCL_ECOLI
8 PsiBlast_PDB 93.7852% -62 - C1 -1E7R 10.0 FCL_ECOLI
1 PsiBlast_PDB 93.3253% -66 - C1 -1BSV 8.8 FCL_ECOLI
2 PsiBlast_PDB 92.7553% -66 - C1 -1FXS 10.1 FCL_ECOLI
5 PsiBlast_PDB 92.7453% -63 - C1 -1E6U 9.0 FCL_ECOLI
7 PsiBlast_PDB 92.7252% -66 - C1 -1BWS 8.0 FCL_ECOLI
3 PsiBlast_PDB 92.3853% -67 - C1 -1GFS - FCL_ECOLI -
6 PsiBlast_PDB 91.5752% -63 - C1 -1E7Q 9.3 FCL_ECOLI
4 PsiBlast_PDB 91.0952% -63 - C1 -1E7S 8.6 FCL_ECOLI
56 HHSearch 63.5131% 1 - C1 -4B8W - FCL_HUMAN -
41 HHSearch 60.1927% -3 - C1 -2C5A - GME_ARATH -
46 HHSearch 57.7317% -29 - C1 -1ORR - RFBE_SALTI -
35 PsiBlast_CBE 55.9832% -7 - C1 -4B8Z 6.8 FCL_HUMAN
29 PsiBlast_CBE 55.8032% -2 - C1 -4BL5 - FCL_HUMAN -
11 PsiBlast_PDB 55.7132% -8 - C1 -4B8Z 5.8 FCL_HUMAN
13 PsiBlast_PDB 55.6432% -4 - C1 -4B8W - FCL_HUMAN -
21 PsiBlast_CBE 55.4732% -2 - C1 -4BL5 - FCL_HUMAN -
37 PsiBlast_CBE 54.9532% -9 - C1 -4B8Z - FCL_HUMAN -
32 PsiBlast_CBE 54.7432% -7 - C1 -4BKP - FCL_HUMAN -