@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y1A5: (2018-01-24 )
MAQEFSYEIVEEIAILSENNKGWRKELNLVSWNGRPPKFDLRDWAPDHEKMGKGLTLTNEEFEQLQKAIENM

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DT_A_4(4G06)
?
[Raw transfer]




DT_A_4(4G06)
?
[Raw transfer]




DT_A_3(4G06)
?
[Raw transfer]




CIT_A_4(3OBH)
?
[Raw transfer]




CIT_A_4(3OBH)
?
[Raw transfer]




CIT_A_4(3OBH)
?
[Raw transfer]




NACID_C_3(2LTT)
?
[Raw transfer]

-

NACID_C_3(2LTT)
?
[Raw transfer]

-

1 PsiBlast_PDB 75.0776% -14 - C2 -3PM7 - ? -
6 PsiBlast_PDB 70.1058% -10 - C2 -3OBH 3.2 ?
37 HHSearch 69.5756% -10 - C2 -3OBH 3.2 ?
5 PsiBlast_PDB 67.9158% -16 - C2 -4G06 3.0 ?
36 HHSearch 67.0056% -16 - C2 -4G06 3.0 ?
2 PsiBlast_PDB 64.3661% 18 - C2 -2LTD - ? -
26 Fugue 62.3856% 23 - C2 -3OBH 3.1 ?
4 PsiBlast_PDB 61.9559% -23 - C2 -2L3A - ? -
18 PsiBlast_CBE 61.0661% 14 - C2 -2LTT 11.8 ?
3 PsiBlast_PDB 60.7261% 8 - C2 -2LTT 11.4 ?
38 HHSearch 59.1356% 20 - C2 -2L3A - ? -
50 HHSearch 46.2010%-153 - C2 -2JZN - ? -
47 HHSearch 43.7824%-103 - C2 -5T5D - ? -
8 PsiBlast_PDB 41.3735% -58 - C2 -4X3K - CBX7_MOUSE -
55 HHSearch 41.2425% -99 - C2 -3EPV - CNRR_CUPMC -
35 Fugue 40.9414% -17 - C2 -2CKX - ? -
25 PsiBlast_CBE 39.7935% -57 - C2 -4X3S - CBX7_MOUSE -
21 PsiBlast_CBE 39.6935% -98 - C2 -4X3T - CBX7_MOUSE -
9 PsiBlast_PDB 39.4635% -57 - C2 -4X3S - CBX7_MOUSE -
39 HHSearch 38.7419% -8 - C2 -5A4O - ? -