@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y1A8: (2018-01-24 )
MGKNRVWVEGTIVAALAMVLSLIPIQIGSSFSISLGQIPLTLFALRRGTKAGMLAGFIWGILHFPLGQVYYLSVVQVLIEYPIAYTFAGAAGLMASNVQKGYVDDNTKQIRKSIVFGALIGALSRYFWHFIAGVVFWGAYALWGMNSWLFSFVMNGASGLSTAIVTIIVLLGIQQTTPSIFVPDKRQEL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PG4_A_8(4POV)
THIT_LACLM
[Raw transfer]




PG0_A_15(4MUU)
?
[Raw transfer]




PEG_A_8(4MHW)
?
[Raw transfer]




PG4_A_7(4MES)
?
[Raw transfer]




PGE_A_17(4N4D)
?
[Raw transfer]




BGL_B_13(4TKR)
?
[Raw transfer]




BNG_A_7(3RLB)
?
[Raw transfer]




BGL_B_11(4TKR)
?
[Raw transfer]




44 HHSearch 93.1744%-171 - C6 -4TKR - ? -
1 PsiBlast_PDB 86.1746%-165 - C6 -4TKR - ? -
21 PsiBlast_CBE 86.0946%-165 - C6 -4TKR 3.5 ?
34 Fugue 81.6635%-176 - C6 -3RLB - ? -
46 HHSearch 79.2436%-192 - C6 -3RLB - ? -
2 PsiBlast_PDB 78.5834%-181 - C6 -3RLB 2.4 ?
45 HHSearch 77.5536%-194 * C6 *4MES - ? -
8 PsiBlast_PDB 76.9534%-183 - C6 -4N4D 2.5 ?
23 PsiBlast_CBE 76.7734%-185 - C6 -4POP - THIT_LACLM -
26 PsiBlast_CBE 76.6334%-188 - C6 -3RLB - ? -
22 PsiBlast_CBE 76.6034%-183 - C6 -4POV - THIT_LACLM -
28 PsiBlast_CBE 76.4634%-187 - C6 -4MES - ? -
24 PsiBlast_CBE 76.1234%-182 - C6 -4MUU - ? -
25 PsiBlast_CBE 75.9134%-180 - C6 -4MHW - ? -
5 PsiBlast_PDB 75.8334%-185 - C6 -4POP - THIT_LACLM -
7 PsiBlast_PDB 75.8134%-184 - C6 -4MES 2.4 ?
3 PsiBlast_PDB 75.6134%-185 - C6 -4MHW 2.4 ?
4 PsiBlast_PDB 75.5934%-186 - C6 -4MUU 2.3 ?
27 PsiBlast_CBE 75.3734%-183 - C6 -4N4D - ? -
6 PsiBlast_PDB 75.1234%-190 - C6 -4POV 2.0 THIT_LACLM