@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y2S4: (2018-02-01 )
MNIIDELTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDALSNQMRKLFGKDANITFVNNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVASRLEVGISFTEFTYQILQSIDFLHLHKTYDVQLQIGGADQWGNITAGLDLIRKLEGPEAEAFGLTIPLMLKADGTKFGKTAGGAVWLDPKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEDLAKKVETEPEKREAQRRLAEEVTRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEISSTPENIVELLVSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKGKKNYFLAKVID

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

YSA_H_8(1VBM)
SYY_ECOLI
[Raw transfer]



YSA_B_4(2PID)
SYYM_HUMAN
[Raw transfer]



YSA_B_4(2PID)
SYYM_HUMAN
[Raw transfer]



YSA_A_3(2PID)
SYYM_HUMAN
[Raw transfer]



YSA_A_3(2PID)
SYYM_HUMAN
[Raw transfer]



YSA_C_3(1VBN)
SYY_ECOLI
[Raw transfer]



YSA_D_4(1VBN)
SYY_ECOLI
[Raw transfer]



TYA_B_4(3ZXI)
SYYM_HUMAN
[Raw transfer]



TYA_A_3(3ZXI)
SYYM_HUMAN
[Raw transfer]



YSA_G_7(1VBM)
SYY_ECOLI
[Raw transfer]



YSA_G_7(1VBM)
SYY_ECOLI
[Raw transfer]



TYA_C_3(3TS1)
SYY_GEOSE
[Raw transfer]



AZY_A_2(2YXN)
SYY_ECOLI
[Raw transfer]



AZY_A_2(2YXN)
SYY_ECOLI
[Raw transfer]



TYR_S_3(1TYD)
SYY_GEOSE
[Raw transfer]



TYR_S_3(1TYB)
SYY_GEOSE
[Raw transfer]



TYR_S_3(1TYD)
SYY_GEOSE
[Raw transfer]



TYR_E_5(1X8X)
SYY_ECOLI
[Raw transfer]



TYR_S_3(1TYA)
SYY_GEOSE
[Raw transfer]



TYR_C_3(1Y42)
SYYM_NEUCR
[Raw transfer]



TYR_C_3(4TS1)
SYY_GEOSE
[Raw transfer]



TYR_C_3(1WQ4)
SYY_ECOLI
[Raw transfer]



TYR_D_4(4TS1)
SYY_GEOSE
[Raw transfer]



IYR_C_3(1WQ3)
SYY_ECOLI
[Raw transfer]



TYB_A_7(1H3E)
SYY_THET2
[Raw transfer]



TYR_X_2(4OJM)
SYYM_NEUCR
[Raw transfer]



TYR_X_2(4OJM)
SYYM_NEUCR
[Raw transfer]
177 HHSearch 78.2741% -11 - C4 -2JAN - SYY_MYCTU -
13 PsiBlast_PDB 77.1941% -9 - C4 -2JAN - SYY_MYCTU -
176 HHSearch 76.2241% -9 - C4 -2JAN - SYY_MYCTU -
175 HHSearch 72.8056% -4 - C4 -1JIL - SYY_STAAE -
10 PsiBlast_PDB 72.2757% -10 - C4 -1TYB 2.6 SYY_GEOSE
8 PsiBlast_PDB 72.1957% -15 - C4 -1TYD 3.4 SYY_GEOSE
7 PsiBlast_PDB 72.1957% -17 - C4 -1TYC - SYY_GEOSE -
9 PsiBlast_PDB 72.0957% -14 - C4 -1TYA 2.8 SYY_GEOSE
4 PsiBlast_PDB 72.0656% -3 - C4 -1JIL - SYY_STAAE -
178 HHSearch 71.9755% -10 - C4 -2TS1 - SYY_GEOSE -
5 PsiBlast_PDB 71.2255% -14 - C4 -2TS1 - SYY_GEOSE -
6 PsiBlast_PDB 70.6955% -11 - C4 -3TS1 6.5 SYY_GEOSE
3 PsiBlast_PDB 70.6356% -5 - C4 -1JIK - SYY_STAAE -
188 HHSearch 70.2056% 6 - C4 -1TYD 3.4 SYY_GEOSE
21 PsiBlast_CBE 69.9157% -5 - C4 -4TS1 2.9 SYY_GEOSE
187 HHSearch 69.7354% -5 - C4 -2YXN 2.5 SYY_ECOLI
11 PsiBlast_PDB 69.4557% -8 - C4 -4TS1 2.7 SYY_GEOSE
2 PsiBlast_PDB 69.2556% -9 - C4 -1JIJ - SYY_STAAE -
12 PsiBlast_PDB 69.2452% -5 - C4 -1X8X 3.2 SYY_ECOLI
22 PsiBlast_CBE 68.9052% -5 - C4 -1VBM 7.5 SYY_ECOLI
17 PsiBlast_PDB 68.8352% -5 - C4 -1WQ4 2.9 SYY_ECOLI
15 PsiBlast_PDB 68.5252% -6 - C4 -1WQ3 3.4 SYY_ECOLI
23 PsiBlast_CBE 68.3852% -8 - C4 -1VBN 6.7 SYY_ECOLI
18 PsiBlast_PDB 68.3452% -6 - C4 -1VBN 7.0 SYY_ECOLI
16 PsiBlast_PDB 68.3352% -5 - C4 -2YXN 2.5 SYY_ECOLI
184 HHSearch 68.2754% -7 * C4 *1VBM 7.6 SYY_ECOLI
14 PsiBlast_PDB 67.8552% -6 - C4 -1VBM 7.6 SYY_ECOLI
181 HHSearch 63.9637% -11 - C4 -4OJM 3.4 SYYM_NEUCR
27 PsiBlast_CBE 62.5235% -35 - C4 -1Y42 3.2 SYYM_NEUCR
186 HHSearch 62.2042% -6 - C4 -2PID 7.8 SYYM_HUMAN
185 HHSearch 61.6542% 12 - C4 -2PID 7.9 SYYM_HUMAN
26 PsiBlast_CBE 61.2235% -30 - C4 -4OJM 3.4 SYYM_NEUCR
19 PsiBlast_PDB 60.0743% -28 - C4 -2PID 7.9 SYYM_HUMAN
25 PsiBlast_CBE 59.9543% -27 - C4 -2PID 7.8 SYYM_HUMAN
20 PsiBlast_PDB 59.6043% -30 - C4 -3ZXI 7.5 SYYM_HUMAN
24 PsiBlast_CBE 59.2543% -29 - C4 -3ZXI 7.3 SYYM_HUMAN