@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : O2AP1_HUMAN: (2016-01-11 )
MKNKTVLTEFILLGLTDVPELQVAVFTFLFLAYLLSILGNLTILILTLLDSHLQTPMYFFLRNFSFLEISFTNIFIPRVLISITTGNKSISFAGCFTQYFFAMFLGATEFYLLAAMSYDRYVAICKPLHYTTIMSSRICIQLIFCSWLGGLMAIIPTITLMSQQDFCASNRLNHYFCDYEPLLELSCSDTSLIEKVVFLVASVTLVVTLVLVILSYAFIIKTILKLPSAQQRTKAFSTCSSHMIVISLSYGSCMFMYINPSAKEGDTFNKGVALLITSVAPLLNPFIYTLRNQQVKQPFKDMVKKLLNL

Atome Classification :

(20 SA) .........10......---------------.----------------.20........30........40........50........60........70....-....80........90........100.......110.......120.......130.......140.......150.......160.---......170.......180-.....-------.-------.190.......200.......210.......220-.....---------....230------------------.----..----......240.......250..--------.....260---...---.-------....270-....---.....280.......290.......300.......---------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MKNKTVLTEFILLGLTD---------------V----------------PELQVAVFTFLFLAYLLSILGNLTILILTLLDSHLQTPMYFFLRNFSFLEISFTNIF-IPRVLISITTGNKSISFAGCFTQYFFAMFLGATEFYLLAAMSYDRYVAICKPLHYTTIMSSRICIQLIFCSWLGGLMAIIPTITLMSQ---QDFCASNRLNHYFCDYEPL-LELSC-------S-------DTSLIEKVVFLVASVTLVVTLVLVILSYAFII---KTILK---------LPSAQ--------------------Q----RT----KAFSTCSSHMIVISLSYGSCM--------FMYINPS----AKE---G-------DTFNK---GVAL---LITSVAPLLNPFIYTLRNQQVKQPFKDMVKKLLNL---------------------
8 PsiBlast_PDB 90.8722%-138 - C6 -2YDO ? A:[18-305] ----------------------------------------------------------------VLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLA-IP-FAIAISTGFCA-ACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICW---VLSFAIGLTPMLG---WNNCGQPKEGKAHSQGCGE-GQVACLF-----E-------DVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMES-------------------------------------TLQ-KEVHAAKSLAIIVGL-FALCWLPLHIINCFTFFCPD----CSH---A-------PLWLM---YLAI---VLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR---------------------
9 PsiBlast_PDB 89.9922%-142 - C6 -2YDV ? A:[18-305] ----------------------------------------------------------------VLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLA-IP-FAIAISTGFCA-ACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICW---VLSFAIGLTPMLG---WNNCGQPKEGKAHSQGCGE-GQVACLF-----E-------DVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQ-----------------------------------STLQ-KEVHAAKSLAIIVGL-FALCWLPLHIINCFTFFCPD----CSH---A-------PLWLM---YLAI---VLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR---------------------
10 PsiBlast_PDB 89.5322%-137 - C6 -4UG2 ? A:[18-305] ----------------------------------------------------------------VLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLA-IP-FAIAISTGFCA-ACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICW---VLSFAIGLTPMLG---WNNCGQPKEGKAHSQGCGE-GQVACLF-----E-------DVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQL-----------------------------------A----RSTLQ-KEVHAAKSLAIIVGL-FALCWLPLHIINCFTFFCPD----CSH---A-------PLWLM---YLAI---VLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR---------------------
11 PsiBlast_PDB 89.3022%-140 - C6 -4UHR AA2AR_HUMAN A:[18-305] ----------------------------------------------------------------VLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLA-IP-FAIAISTGFCA-ACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICW---VLSFAIGLTPMLG---WNNCGQPKEGKA---GCGE-GQVACLF-----E-------DVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQP---LPGER--------------------A----RSTLQ-KEVHAAKSLAIIVGL-FALCWLPLHIINCFTFFCPD----C-H---A-------PLWLM---YLAI---VLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR---------------------
6 PsiBlast_PDB 89.1622%-152 - C6 -3VG9 ? A:[18-304] ----------------------------------------------------------------VLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLA-IP-FAITISTGFCA-ACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWV---LSFAIGLTPMLG---WNNCGQ-------SQGCGE-GQVACLF-----E-------DVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQP---LPGER--------------------A----RSTLQ-KEVHAAKSLAIIVGL-FALCWLPLHIINCFTFFCPD----CSH---A-------PLWLM---YLAI---VLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR---------------------
7 PsiBlast_PDB 88.3822%-143 - C6 -3VGA AA2AR_HUMAN A:[18-304] ----------------------------------------------------------------VLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLA-IP-FAITISTGFCA-ACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWV---LSFAIGLTPMLG---WNNCGQ-------SQGCGE-GQVACLF-----E-------DVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQP---LPGER--------------------A----RSTLQ-KEVHAAKSLAIIVGL-FALCWLPLHIINCFTFFCPD----CSH---A-------PLWLM---YLAI---VLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVL----------------------
3 PsiBlast_PDB 86.8621%-141 - C6 -3RFM AA2AR_HUMAN A:[18-305] ----------------------------------------------------------------VLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLA-IP-FAITISTGFCA-ACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICW---VLSFAIGLTPMLG---WNNCGQP--------GCGE-GQVACLF-----E-------DVVPMNYMVYFNFFACVLVPLLLMLGVYLRIF---AAARRQLKQMESQPLPGER--------------------A----RSTLQ-KEVHAAKSAAIIAGL-FALCWLPLHIINCFTFFCPD----CSH---A-------PLWLM---YLAI---VLAHTNSVVNPFIYAYRIREFRQTFRKIIRS-------------------------
53 Fugue 86.3219%-121 - C6 -1U19 OPSD_BOVIN A:[4-349] MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAE----------------PWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGG-FTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAF-TWVMALACAAPPL------------------VGWSRYIPEGMQCSCGIDYYTPH-------EETNNESFVIYMFVVHFIIPLIVIFFCYGQLV---FTVKE---------AAAQQ--------------------QESATTQ----KAEKEVTRMVIIMVIAFLICW--------LPYAGVAFYIFTHQ---G-------SDFGP---IFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA
52 Fugue 85.7919%-120 - C6 -1F88 OPSD_BOVIN A:[1-348] -MNGTEGPNFYVPFSNK---------------TGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGG-FTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSR------------------YIPEGMQCSC-------GIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLV---FTVKE---------AAASA--------------------T----TQ----KAEKEVTRMVIIMVIAFLICW--------LPYAGVA----FYI---FTHQGSDFGPIFM---TIPA---FFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPSTTVSKTETSQVAPA------
46 HHSearch 85.4916%-128 - C6 -2Z73 OPSD_TODPA A:[32-332] --------------------------------------------------AVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGA---YTL----EGVLCNCSFDYI-S-------------------RDSTTRSNILCMFILGFFGPILIIFFCYFNIV---MSVSN---------HEKEMAAMAKRLNAKELRKAQAGANA----EM----RLAKISIVIVSQFLLSWSPYA--------VVALLAQ----FGPLEWV-------TPYAA---QLPV---MFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTC---------------------
4 PsiBlast_PDB 85.3521%-143 - C6 -3UZA AA2AR_HUMAN A:[18-305] ----------------------------------------------------------------VLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLA-IP-FAITISTGFCA-ACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICW---VLSFAIGLTPMLG---WNNCGQP--------GCGE-GQVACLF-----E-------DVVPMNYMVYFNFFACVLVPLLLMLGVYLRIF---AAARRQLKQMESQPLPGER--------------------A----RSTLQ-KEVHAAKSAAIIAGL-FALCWLPLHIINCFTFFCPD----CSH---A-------PLWLM---YLAI---VLAHTNSVVNPFIYAYRIREFRQTFRKIIRS-------------------------
17 PsiBlast_PDB 85.2519%-129 - C6 -3DQB GNAT1_BOVIN (first) A:[43-315] ----------------------------------------------------------YMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGG-FTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAF-TWVMALACAAPPLVGWSRYIPEGMQCSCGIDYY-----------TP-------H-------EETNNESFVIYMFVVHFIIPLIVIFFCYGQLV---FTVKE---------AAAQQ--------------------Q----ESATTQKAEKEVTRMVIIMVIAFLICW--------LPYAGVAFYIFTHQ---G-------SDFGPIFMTIPA---FFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN----------------------
16 PsiBlast_PDB 84.9719%-123 - C6 -1F88 OPSD_BOVIN A:[43-315] ----------------------------------------------------------YMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGG-FTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAF-TWVMALACAAPPLVGWSRYIPEGMQCSCGIDYY-----------TP-------H-------EETNNESFVIYMFVVHFIIPLIVIFFCYGQLV---FTVKE---------AAA----------------------------SATTQKAEKEVTRMVIIMVIAFLICW--------LPYAGVAFYIFTHQ---G-------SDFGPIFMTIPA---FFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNP---------------------
2 PsiBlast_PDB 84.9721%-142 - C6 -3REY AA2AR_HUMAN A:[18-305] ----------------------------------------------------------------VLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLA-IP-FAITISTGFCA-ACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICW---VLSFAIGLTPMLG---WNNCGQP--------GCGE-GQVACLF-----E-------DVVPMNYMVYFNFFACVLVPLLLMLGVYLRIF---AAARRQLKQMESQPLPGER--------------------A----RSTLQ-KEVHAAKSAAIIAGL-FALCWLPLHIINCFTFFCPD----CSH---A-------PLWLM---YLAI---VLAHTNSVVNPFIYAYRIREFRQTFRKIIRS-------------------------
18 PsiBlast_PDB 84.8819%-128 - C6 -3PQR OPSD_BOVIN A:[43-315] ----------------------------------------------------------YMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGG-FTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAF-TWVMALACAAPPLVGWSRYIPEGMQCSCGIDYY-----------TP-------H-------EETNNESFVIYMFVVHFIIPLIVIFFCYGQLV---FTVKE---------AAAQQ--------------------Q----ESATTQKAEKEVTRMVIIMVIAFLICW--------LPYAGVAFYIFTHQ---G-------SDFGPIFMTIPA---FFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN----------------------
15 PsiBlast_PDB 84.7619%-123 - C6 -3C9L OPSD_BOVIN A:[43-315] ----------------------------------------------------------YMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGG-FTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAF-TWVMALACAAPPLVGWSRYIPEGMQCSCGIDYY-----------TP-------H-------EETNNESFVIYMFVVHFIIPLIVIFFCYGQLV---FTVKE---------AAAQQ--------------------Q----ESATTQKAEKEVTRMVIIMVIAFLICW--------LPYAGVAFYIFTHQ---G-------SDFGPIFMTIPA---FFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKND---------------------
1 PsiBlast_PDB 84.5421%-144 - C6 -3PWH ? A:[18-305] ----------------------------------------------------------------VLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLA-IP-FAITISTGFCA-ACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICW---VLSFAIGLTPMLG---WNNCGQP--------GCGE-GQVACLF-----E-------DVVPMNYMVYFNFFACVLVPLLLMLGVYLRIF---AAARRQLKQMESQPLPGER--------------------A----RSTLQ-KEVHAAKSAAIIAGL-FALCWLPLHIINCFTFFCPD----CSH---A-------PLWLM---YLAI---VLAHTNSVVNPFIYAYRIREFRQTFRKIIRS-------------------------
5 PsiBlast_PDB 84.3521%-143 - C6 -3UZC AA2AR_HUMAN A:[18-305] ----------------------------------------------------------------VLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLA-IP-FAITISTGFCA-ACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICW---VLSFAIGLTPMLG---WNNCGQP--------GCGE-GQVACLF-----E-------DVVPMNYMVYFNFFACVLVPLLLMLGVYLRIF---AAARRQLKQMESQPLPGER--------------------A----RSTLQ-KEVHAAKSAAIIAGL-FALCWLPLHIINCFTFFCPD----CSH---A-------PLWLM---YLAI---VLAHTNSVVNPFIYAYRIREFRQTFRKIIRS-------------------------
19 PsiBlast_PDB 84.1519%-129 - C6 -3PXO OPSD_BOVIN A:[43-315] ----------------------------------------------------------YMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGG-FTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAF-TWVMALACAAPPLVGWSRYIPEGMQCSCGIDYY-----------TP-------H-------EETNNESFVIYMFVVHFIIPLIVIFFCYGQLV---FTVKE---------AAAQQ--------------------Q----ESATTQKAEKEVTRMVIIMVIAFLICW--------LPYAGVAFYIFTHQ---G-------SDFGPIFMTIPA---FFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN----------------------
20 PsiBlast_PDB 83.6619%-128 - C6 -4J4Q GNAT1_BOVIN (first) A:[43-315] ----------------------------------------------------------YMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGG-FTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAF-TWVMALACAAPPLVGWSRYIPEGMQCSCGIDYY-----------TP-------H-------EETNNESFVIYMFVVHFIIPLIVIFFCYGQLV---FTVKE---------AAAQQ--------------------Q----ESATTQKAEKEVTRMVIIMVIAFLICW--------LPYAGVAFYIFTHQ---G-------SDFGPIFMTIPA---FFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN----------------------