@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : 550_tII_BRANA: (2014-05-10 )
TTVESFGEVAQSCVVTELAPCLPAMTTAGDPTTECCDKLVEQKPCLCGYIRNPAYSMYVTSPNGRKVLDFCKVPFPSC

Atome Classification :

(20 SA) ----------------------------------------------------------------------------.........10..-----.--..--..---.20....--.--...--30-.-----.-----------.......40-----------.-----.-...-...50----.-.-.------------....--------.60--...-.....70...-..-------..--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----------------------------------------------------------------------------TTVESFGEVAQSC-----V--VT--EL---APCLPAM--T--TAG--D--P-----T-----------TECCDKLVE-----------Q-----K-PCL-CGYIR----N-P-A------------YSMY--------VTS--PNG-RKVLDFCKVP-FP-------SC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11 HHSearch 89.8436%-106 - C4 -1N89 NLT2G_WHEAT A:[1-67] ---------------------------------------------------------------------------------------AC-----Q--AS--QL---AVCASAI--L--SGA--K--P-----S-----------GECCGNLRA-----------Q-----Q-GCF-CQYAK----D-P-T------------YGQY--------IRS--PHA-RDTLTSCGLA-VP-------HC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 Fugue 87.4035% -99 - C4 -1L6H - NLTPX_ORYSJ A:[1-69] --------------------------------------------------------------------------------------AGC-----N--AG--QL---TVCTGAI--A--GGA--R--P-----T-----------AACCSSLRA-----------Q-----Q-GCF-CQFAK----D-P-R------------YGRY--------VNS--PNA-RKAVSSCGIA-LP-------TCH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12 HHSearch 87.1135% -98 - C4 -1L6H - NLTPX_ORYSJ A:[1-68] --------------------------------------------------------------------------------------AGC-----N--AG--QL---TVCTGAI--A--GGA--R--P-----T-----------AACCSSLRA-----------Q-----Q-GCF-CQFAK----D-P-R------------YGRY--------VNS--PNA-RKAVSSCGIA-LP-------TC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24 SP3 83.9930% -99 - C4 -1L6H - NLTPX_ORYSJ A:[1-69] --------------------------------------------------------------------------------------AGC-----N--AG--QL---TVCTGAI--A--GGA--R--P-----T-----------AACCSSLRA-----------Q-----Q-GCF-CQFAK----D-P-R------------YGRY--------VNS--PNA-RKAVSSCGIA-LP-------TCH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18 HHSearch 79.5127% -95 - C4 -1AFH - NLTP_MAIZE A:[2-80] --------------------------------------------------------------------------------------ISC-----G--QVASAI---APCISYA--R--GQG--SG-P-----S-----------AGCCSGVRSLNNAARTTADRR-----A-ACN-C--LK----N-A-A-------------AGVSG------LNA--GNA-ASIPSKCGVS-IP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13 HHSearch 77.7428% -99 - C4 -2RKN DIRL1_ARATH A:[4-77] ---------------------------------------------------------------------------------------LC-----GMSQD--EL---NECKPAV--S--KENPTS--P-----S-----------QPCCTALQH-----------A-----DFACL-CGYKN----S-P-W------------LGSFG-------VDP--ELA-SALPKQCGLA-NAP------TC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19 HHSearch 76.5627%-106 - C4 -1T12 - NLTP1_TOBAC A:[2-78] --------------------------------------------------------------------------------------ITC-----G--QVTSNL---APCLAYL--R--NTG-----P-----L-----------GRCCGGVKALVNSARTTEDRQ-----I-ACT-C--LK----S-A-A-------------GAISG------INL--GKA-AGLPSTCGVN-IP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 Fugue 76.4927% -91 - C4 -2RKN DIRL1_ARATH A:[1-77] ------------------------------------------------------------------------------------AIDLCGM---S--QD--EL---NECKPAV--S--KEN--PTSP-----S-----------QPCCTALQHA----------D-----F-ACL-CGYKN----S-P-W------------LGSFG-------VDP--ELA-SALPKQCGLA-NAP------TC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20 HHSearch 74.6425%-124 - C4 -1HYP - HPSE_SOYBN A:[6-73] --------------------------------------------------------------------------------------PSC-----P------DL---SICLNILGGS--LGT-----------V-----------DDCCALIGG-----------LGDIEAI-VCL-CIQLR----A----------------LGI---------LNL--NRNLQLILNSCGRS-YP-------S---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32 SP3 70.7924% -62 - C4 -1PS6 PDXA_ECOLI A:[1-328] ----------------------VKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTNRAAMLGLPLTLRPYSPNSPAQPQ-----T--AG--TLTLLPVALRAP--V--TAG--Q--L-----A-----------VENGHYVVE-----------T-----L-ARA-CDGCL----N-G-E------------FAAL--------ITG--PVH-KGVINDAGIP-FT-------GHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLNELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLAIKMIVNTQ-------------------------------------
16 HHSearch 69.2327%-105 - C4 -2ALG NLTP1_PRUPE A:[2-79] --------------------------------------------------------------------------------------ITC-----G--QVSSSL---APCIPYV--R--GGG--A--V-----P-----------PACCNGIRNVNNLARTTPDRQ-----A-ACN-C--LK----Q-L-S-------------ASVPG------VNP--NNA-AALPGKCGVS-IP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8 Fugue 68.2430% -47 - C3 -1YU0 - ? A:[5-380] VQFRGGTTAQHATFTGAAREITVDTDKNTVVVHDGATAGGFPLARHDLVKTAFIKADKSAVAFTRTGNATASIKAGTIVEVNGKLVQFT-----A--DT--AI---T--MPAL--T--AGT--D--Y-----A-----------IYVCDD----------------------GTV-RADSN----F-S-A------------PTGY---------TS--TTA-RKVGGFHYAP-GS-------NAAAQAGGNTTAQINEYSLWDIKFRPAALDPRGMTLVAGAFWADIYLLGVNHLTDGTSKYNVTIADGSASPKKSTKFGGDGSAAYSDGAWYNFAEVMTHHGKRLPNYNEFQALAFGTTEATSSGGTDVPTTGVNGTGATSAWNIFTSKWGVVQASGCLWTWGNEFGGVNGASEYTANTGGRGSVYAQPAAALFGGAWNGTSLSGSRAALWYSGPSFSFAFFGARGVCDHLIL
3 Fugue 66.6114%-109 * C6 *1QAS - PLCD1_RAT A:[205-298] -----------------------------------------------------------------YKMLTQRAEIDRAFEEAAGSAETL-----S--VE--RL---VTFLQHQ--Q--REE--E--A-----G-----------PALALSLIE-----------RYEPSET-AKA-QRQMT----K-D-G------------FLMY--------LLS--ADG-NAFSLAHRRV-YQ-------DM--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33 SP3 65.4516%-111 - C4 -1S6D - 2SS8_HELAN A:[1-103] ------------------------------------------------------------------------------PYGRGRTESGCYQQMEE--AE--ML---NHCGMYL--MKNLGE--R--S-----QVSPRMREEDHKQLCCMQLKNL----------D-----E-KCM-CPAIMMMLNE-P-M------------WIRM--------RDQVMSMA-HNLPIECNLM-SQ-------PCQM------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25 SP3 64.6621% -77 * C4 *1FK5 NLTP_MAIZE A:[1-93] -------------------------------------------------------------------------------------AISC-----GQVAS--AI---APCISYA--R--GQG--SG-P-----S-----------AGCCSGVRS-----------L-----N-NA-----AR----T-T-ADRRAACNCLKNAAAGVSG------LNA--GNA-ASIPSKCGVS-IPYTISTSTDCSRVN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14 HHSearch 64.3325% -53 - C4 -1BWO NLTP1_WHEAT A:[8-78] --------------------------------------------------------------------------------------------------S--LV---RPCLSYV--Q--GGP--G--P-----S-----------GQCCDGVKNLHNQARSQSDRQ-----S-ACN-CLKGI----A-R-G------------IH-N--------LNE--DNA-RSIPPKCGVN-LP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17 HHSearch 58.7021% -80 - C4 -1SIY - NLTP1_VIGRR A:[7-78] -------------------------------------------------------------------------------------------------QG--NL---AQCIGFL--Q--KGG--V--V-----P-----------PSCCTGVKNILNSSRTTADRR-----A-VCS-CLKAA----A-G-A------------VR-G--------INP--NNA-EALPGKCGVN-IP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28 SP3 51.018%-102 - C4 -1F9M - TRXF_SPIOL A:[10-121] ------------------------------------------------------------------------------MEAIVGKVTEV-----N--KD--TF------WPIV--KA-AGD--K--PVVLDMF-----------TQWCGPCKA-----------M-----A-PKY-EKLAE----EYL-DVI----------FLKL--------DCN--QEN-KTLAKELGIRVVP-------TFKILKENSVVGEVTGAKYDKLLEAIQAARS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27 SP3 47.9316% -61 - C4 -1U78 - TC3A_CAEEL A:[2-104] -----------------------------------------------------------------------------------PRGSAL-----S--DT--ER---AQ-LDVM--K--LLN--V--S-----L-----------HEMSRKISR-----------S-----R-HCI-RVYLK----D-PVS------------YGTSKRAPRRKALSV--RDE-RNVIRAASNS-CK-------TARDIRNELQLSASKRTILNVIKRSG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10 Fugue 46.4046%-118 - C2 -1OQE - TR13C_HUMAN K:[1-31] ------------------------------------------------------------------------------------------------------P---TPCVPA---------------------------------ECFDLLV------------------R-HCVACGLLR----T-P-R------------PKPA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


User Run . : Multi Template Modeling Result:

(3 SA) .........10........20........30........40........50........60........70.......
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) TTVESFGEVAQSCVVTELAPCLPAMTTAGDPTTECCDKLVEQKPCLCGYIRNPAYSMYVTSPNGRKVLDFCKVPFPSC
40 96.40100%-117 - C- -M040 - A:[1-167] TTVESFGEVAQSCVVTELAPCLPAMTTAGDPTTECCDKLVEQKPCLCGYIRNPAYSMYVTSPNGRKVLDFCKVPFPSC
41 95.81100%-126 - C- -M041 - A:[1-167] TTVESFGEVAQSCVVTELAPCLPAMTTAGDPTTECCDKLVEQKPCLCGYIRNPAYSMYVTSPNGRKVLDFCKVPFPSC
39 37.48100% 6 - C- -M039 - A:[3-115] TTVESFGEVAQSCVVTELAPCLPAMTTAGDPTTECCDKLVEQKPCLCGYIRNPAYSMYVTSPNGRKVLDFCKVPFPSC