@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2103: (2016-03-31 )
MSDLFTTIKGQVTGKNVRIVLPEGTDERIVGAAARLQKENIVKPILLGNKAEIEAKAKEIGVSVEGIAIHEPATDPLFDELVAAFVERRKGKATEEAARKMLVDPNYFGTMLVYTGKAEGLVSGAAHSTGDTVRPALQIIKTKPGVSKVAGAMIMVRGEERYLFSDVAINIAPVAADLAENAIVSAETAEIFGIDPRVAMLSFSTKGSAKSDETEKVVEATALAKEKAPELTLDGEFQFDAAFVPTVAEKKAPGSVIKGDANVFIFPSLEAGNIGYKIAQRLGNFEAVGPILQGLNAPVNDLSRGCNTDDVYNLTLITAAQAVNK

Atome Classification :

(23 SA) .........10........20........30........40........50........60........70.......-.80........-90..-......100.......110.......120.......130.......140.......150......------.160------.-----......170.......180.......190....-....200.......210.......220.......230.----......240.......250.......260.......270.......280.......290.......300.......310.......320...
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MSDLFTTIKGQVTGKNVRIVLPEGTDERIVGAAARLQKENIVKPILLGNKAEIEAKAKEIGVSVEGIAIHEPATDPLF-DELVAAFVERR-KGKA-TEEAARKMLVDPNYFGTMLVYTGKAEGLVSGAAHSTGDTVRPALQIIKTKPGVSKVAGAMIMVRG------EERY------L-----FSDVAINIAPVAADLAENAIVSAETAE-IFGID-PRVAMLSFSTKGSAKSDETEKVVEATALAKEKAPELTL----DGEFQFDAAFVPTVAEKKAPGSVIKGDANVFIFPSLEAGNIGYKIAQRLGNFEAVGPILQGLNAPVNDLSRGCNTDDVYNLTLITAAQAVNK
25 PsiBlast_CBE 99.1672% -94 - C3 -1TD9 PTAS_BACSU D:[7-329] MADLFSTVQEKVAGKDVKIVFPEGLDERILEAVSKLAGNKVLNPIVIGNENEIQAKAKELNLTLGGVKIYDPHTYEGM-EDLVQAFVERR-KGKA-TEEQARKALLDENYFGTMLVYKGLADGLVSGAAHSTADTVRPALQIIKTKEGVKKTSGVFIMARG------EEQY------V-----FADCAINIAPDSQDLAEIAIESANTAK-MFDIE-PRVAMLSFSTKGSAKSDETEKVADAVKIAKEKAPELTL----DGEFQFDAAFVPSVAEKKAPDSEIKGDANVFVFPSLEAGNIGYKIAQRLGNFEAVGPILQGLNMPVNDLSRGCNAEDVYNLALITAAQAL--
34 HHSearch 98.9273% -94 - C3 -1TD9 PTAS_BACSU A:[7-328] MADLFSTVQEKVAGKDVKIVFPEGLDERILEAVSKLAGNKVLNPIVIGNENEIQAKAKELNLTLGGVKIYDPHTYEGM-EDLVQAFVERR-KGKA-TEEQARKALLDENYFGTMLVYKGLADGLVSGAAHSTADTVRPALQIIKTKEGVKKTSGVFIMARG------EEQY------V-----FADCAINIAPDSQDLAEIAIESANTAK-MFDIE-PRVAMLSFSTKGSAKSDETEKVADAVKIAKEKAPELTL----DGEFQFDAAFVPSVAEKKAPDSEIKGDANVFVFPSLEAGNIGYKIAQRLGNFEAVGPILQGLNMPVNDLSRGCNAEDVYNLALITAAQA---
1 PsiBlast_PDB 98.8272% -94 - C3 -1TD9 PTAS_BACSU A:[7-329] MADLFSTVQEKVAGKDVKIVFPEGLDERILEAVSKLAGNKVLNPIVIGNENEIQAKAKELNLTLGGVKIYDPHTYEGM-EDLVQAFVERR-KGKA-TEEQARKALLDENYFGTMLVYKGLADGLVSGAAHSTADTVRPALQIIKTKEGVKKTSGVFIMARG------EEQY------V-----FADCAINIAPDSQDLAEIAIESANTAK-MFDIE-PRVAMLSFSTKGSAKSDETEKVADAVKIAKEKAPELTL----DGEFQFDAAFVPSVAEKKAPDSEIKGDANVFVFPSLEAGNIGYKIAQRLGNFEAVGPILQGLNMPVNDLSRGCNAEDVYNLALITAAQAL--
23 PsiBlast_CBE 98.6872% -93 - C3 -1TD9 PTAS_BACSU F:[7-329] MADLFSTVQEKVAGKDVKIVFPEGLDERILEAVSKLAGNKVLNPIVIGNENEIQAKAKELNLTLGGVKIYDPHTYEGM-EDLVQAFVERR-KGKA-TEEQARKALLDENYFGTMLVYKGLADGLVSGAAHSTADTVRPALQIIKTKEGVKKTSGVFIMARG------EEQY------V-----FADCAINIAPDSQDLAEIAIESANTAK-MFDIE-PRVAMLSFSTKGSAKSDETEKVADAVKIAKEKAPELTL----DGEFQFDAAFVPSVAEKKAPDSEIKGDANVFVFPSLEAGNIGYKIAQRLGNFEAVGPILQGLNMPVNDLSRGCNAEDVYNLALITAAQAL--
27 PsiBlast_CBE 98.5772% -94 - C3 -1TD9 PTAS_BACSU B:[7-329] MADLFSTVQEKVAGKDVKIVFPEGLDERILEAVSKLAGNKVLNPIVIGNENEIQAKAKELNLTLGGVKIYDPHTYEGM-EDLVQAFVERR-KGKA-TEEQARKALLDENYFGTMLVYKGLADGLVSGAAHSTADTVRPALQIIKTKEGVKKTSGVFIMARG------EEQY------V-----FADCAINIAPDSQDLAEIAIESANTAK-MFDIE-PRVAMLSFSTKGSAKSDETEKVADAVKIAKEKAPELTL----DGEFQFDAAFVPSVAEKKAPDSEIKGDANVFVFPSLEAGNIGYKIAQRLGNFEAVGPILQGLNMPVNDLSRGCNAEDVYNLALITAAQAL--
20 PsiBlast_CBE 98.5472% -92 - C3 -1XCO PTAS_BACSU D:[7-329] MADLFSTVQEKVAGKDVKIVFPEGLDERILEAVSKLAGNKVLNPIVIGNENEIQAKAKELNLTLGGVKIYDPHTYEGM-EDLVQAFVERR-KGKA-TEEQARKALLDENYFGTMLVYKGLADGLVSGAAHSTADTVRPALQIIKTKEGVKKTSGVFIMARG------EEQY------V-----FADCAINIAPDSQDLAEIAIESANTAK-MFDIE-PRVAMLSFSTKGSAKSDETEKVADAVKIAKEKAPELTL----DGEFQFDAAFVPSVAEKKAPDSEIKGDANVFVFPSLEAGNIGYKIAQRLGNFEAVGPILQGLNMPVNDLSRGCNAEDVYNLALITAAQAL--
22 PsiBlast_CBE 98.3772% -92 - C3 -1XCO PTAS_BACSU B:[7-329] MADLFSTVQEKVAGKDVKIVFPEGLDERILEAVSKLAGNKVLNPIVIGNENEIQAKAKELNLTLGGVKIYDPHTYEGM-EDLVQAFVERR-KGKA-TEEQARKALLDENYFGTMLVYKGLADGLVSGAAHSTADTVRPALQIIKTKEGVKKTSGVFIMARG------EEQY------V-----FADCAINIAPDSQDLAEIAIESANTAK-MFDIE-PRVAMLSFSTKGSAKSDETEKVADAVKIAKEKAPELTL----DGEFQFDAAFVPSVAEKKAPDSEIKGDANVFVFPSLEAGNIGYKIAQRLGNFEAVGPILQGLNMPVNDLSRGCNAEDVYNLALITAAQAL--
26 PsiBlast_CBE 98.3072% -92 - C3 -1TD9 PTAS_BACSU C:[7-329] MADLFSTVQEKVAGKDVKIVFPEGLDERILEAVSKLAGNKVLNPIVIGNENEIQAKAKELNLTLGGVKIYDPHTYEGM-EDLVQAFVERR-KGKA-TEEQARKALLDENYFGTMLVYKGLADGLVSGAAHSTADTVRPALQIIKTKEGVKKTSGVFIMARG------EEQY------V-----FADCAINIAPDSQDLAEIAIESANTAK-MFDIE-PRVAMLSFSTKGSAKSDETEKVADAVKIAKEKAPELTL----DGEFQFDAAFVPSVAEKKAPDSEIKGDANVFVFPSLEAGNIGYKIAQRLGNFEAVGPILQGLNMPVNDLSRGCNAEDVYNLALITAAQAL--
21 PsiBlast_CBE 98.2672% -93 - C3 -1XCO PTAS_BACSU C:[7-329] MADLFSTVQEKVAGKDVKIVFPEGLDERILEAVSKLAGNKVLNPIVIGNENEIQAKAKELNLTLGGVKIYDPHTYEGM-EDLVQAFVERR-KGKA-TEEQARKALLDENYFGTMLVYKGLADGLVSGAAHSTADTVRPALQIIKTKEGVKKTSGVFIMARG------EEQY------V-----FADCAINIAPDSQDLAEIAIESANTAK-MFDIE-PRVAMLSFSTKGSAKSDETEKVADAVKIAKEKAPELTL----DGEFQFDAAFVPSVAEKKAPDSEIKGDANVFVFPSLEAGNIGYKIAQRLGNFEAVGPILQGLNMPVNDLSRGCNAEDVYNLALITAAQAL--
2 PsiBlast_PDB 98.2272% -94 - C3 -1XCO PTAS_BACSU A:[7-329] MADLFSTVQEKVAGKDVKIVFPEGLDERILEAVSKLAGNKVLNPIVIGNENEIQAKAKELNLTLGGVKIYDPHTYEGM-EDLVQAFVERR-KGKA-TEEQARKALLDENYFGTMLVYKGLADGLVSGAAHSTADTVRPALQIIKTKEGVKKTSGVFIMARG------EEQY------V-----FADCAINIAPDSQDLAEIAIESANTAK-MFDIE-PRVAMLSFSTKGSAKSDETEKVADAVKIAKEKAPELTL----DGEFQFDAAFVPSVAEKKAPDSEIKGDANVFVFPSLEAGNIGYKIAQRLGNFEAVGPILQGLNMPVNDLSRGCNAEDVYNLALITAAQAL--
19 PsiBlast_CBE 97.7472% -93 - C3 -1XCO PTAS_BACSU E:[7-329] MADLFSTVQEKVAGKDVKIVFPEGLDERILEAVSKLAGNKVLNPIVIGNENEIQAKAKELNLTLGGVKIYDPHTYEGM-EDLVQAFVERR-KGKA-TEEQARKALLDENYFGTMLVYKGLADGLVSGAAHSTADTVRPALQIIKTKEGVKKTSGVFIMARG------EEQY------V-----FADCAINIAPDSQDLAEIAIESANTAK-MFDIE-PRVAMLSFSTKGSAKSDETEKVADAVKIAKEKAPELTL----DGEFQFDAAFVPSVAEKKAPDSEIKGDANVFVFPSLEAGNIGYKIAQRLGNFEAVGPILQGLNMPVNDLSRGCNAEDVYNLALITAAQAL--
18 PsiBlast_CBE 97.7272% -92 - C3 -1XCO PTAS_BACSU F:[7-329] MADLFSTVQEKVAGKDVKIVFPEGLDERILEAVSKLAGNKVLNPIVIGNENEIQAKAKELNLTLGGVKIYDPHTYEGM-EDLVQAFVERR-KGKA-TEEQARKALLDENYFGTMLVYKGLADGLVSGAAHSTADTVRPALQIIKTKEGVKKTSGVFIMARG------EEQY------V-----FADCAINIAPDSQDLAEIAIESANTAK-MFDIE-PRVAMLSFSTKGSAKSDETEKVADAVKIAKEKAPELTL----DGEFQFDAAFVPSVAEKKAPDSEIKGDANVFVFPSLEAGNIGYKIAQRLGNFEAVGPILQGLNMPVNDLSRGCNAEDVYNLALITAAQAL--
3 PsiBlast_PDB 94.3761% -89 - C3 -4E4R PTAS_STAAR A:[5-330] -ADLLNVLKDKLSGKNVKIVLPEGEDERVLTAATQLQATDYVTPIVLGDETKVQSLAQKLNLDISNIELINPATSELK-AELVQSFVERR-KGKT-TEEQAQELLNNVNYFGTMLVYAGKADGLVSGAAHSTGDTVRPALQIIKTKPGVSRTSGIFFMIKG------DEQY------I-----FGDCAINPELDSQGLAEIAVESAKSAL-SFGMD-PKVAMLSFSTKGSAKSDDVTKVQEAVKLAQQKAEEEKLEAIIDGEFQFDAAIVPGVAEKKAPGAKLQGDANVFVFPSLEAGNIGYKIAQRLGGYDAVGPVLQGLNSPVNDLSRGCSIEDVYNLSFITAAQAL--
33 HHSearch 84.3145% -76 - C3 -2AF4 PTAS_METTE C:[2-330] -VTFLEKISERAKKLNKTIALPETEDIRTLQAAAKILERGIADIVLVGNEADIKALAGDLDL--SKAKIVDPKTYEKK-DEYINAFYELRKHKGI-TLENAAEIMSDYVYFAVMMAKLGEVDGVVSGAAHSSSDTLRPAVQIVKTAKGAALASAFFIISVPDCEYGSDGTF------L-----FADSGMVEMPSVEDVANIAVISAKTFELLVQDV-PKVAMLSYSTKGSAKSKLTEATIASTKLAQELAPDIAI----DGELQVDAAIVPKVAASKAPGSPVAGKANVFIFPDLNCGNIAYKIAQRLAKAEAYGPITQGLAKPINDLSRGCSDEDIVGAVAITCVQAAA-
35 HHSearch 81.3941% -79 - C3 -1VMI EUTD_ECOLI A:[13-335] --AIIERCRELALRAPARVVFPDALDQRVLKAAQYLHQQGLATPILVANPFELRQFALSHGVAMDGLQVIDPHGNLAMREEFAHRWLAR--AGEK-TPPDALEKLTDPLMFAAAMVSAGKADVCIAGNLSSTANVLRAGLRIIGLQPGCKTLSSIFLMLPQYS----GPAL------G-----FADCSVVPQPTAAQLADIALASAETWRAITGEE-PRVAMLSFSSNGSARHPCVANVQQATEIVRERAPKLVV----DGELQFDAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIGYKIAQRLGGYRAVGPLIQGLAAPMHDLSRGCSVQEIIELALVAAVPR---
6 PsiBlast_PDB 80.6646% -75 - C3 -1QZT PTAS_METTE A:[16-328] ---------------NKTIALPETEDIRTLQAAAKILERGIADIVLVGNEADIKALAGDLDLSKAKIV--DPKTYEKK-DEYINAFYELR-KHKGITLENAAEIMSDYVYFAVMMAKLGEVDGVVSGAAHSSSDTLRPAVQIVKTAKGAALASAFFIISVP------DCEYGSDGTFL-----FADSGMVEMPSVEDVANIAVISAKTFE-LLVQDVPKVAMLSYSTKGSAKSKLTEATIASTKLAQELAPDIAI----DGELQVDAAIVPKVAASKAPGSPVAGKANVFIFPDLNCGNIAYKIAQRLAKAEAYGPITQGLAKPINDLSRGCSDEDIVGAVAITCVQA---
5 PsiBlast_PDB 80.6546% -69 - C3 -2AF4 PTAS_METTE C:[16-328] ---------------NKTIALPETEDIRTLQAAAKILERGIADIVLVGNEADIKALAGDLDLSKAKIV--DPKTYEKK-DEYINAFYELR-KHKGITLENAAEIMSDYVYFAVMMAKLGEVDGVVSGAAHSSSDTLRPAVQIVKTAKGAALASAFFIISVP------DCEYGSDGTFL-----FADSGMVEMPSVEDVANIAVISAKTFE-LLVQDVPKVAMLSYSTKGSAKSKLTEATIASTKLAQELAPDIAI----DGELQVDAAIVPKVAASKAPGSPVAGKANVFIFPDLNCGNIAYKIAQRLAKAEAYGPITQGLAKPINDLSRGCSDEDIVGAVAITCVQA---
30 PsiBlast_CBE 80.4646% -72 - C3 -1QZT PTAS_METTE C:[16-328] ---------------NKTIALPETEDIRTLQAAAKILERGIADIVLVGNEADIKALAGDLDLSKAKIV--DPKTYEKK-DEYINAFYELR-KHKGITLENAAEIMSDYVYFAVMMAKLGEVDGVVSGAAHSSSDTLRPAVQIVKTAKGAALASAFFIISVP------DCEYGSDGTFL-----FADSGMVEMPSVEDVANIAVISAKTFE-LLVQDVPKVAMLSYSTKGSAKSKLTEATIASTKLAQELAPDIAI----DGELQVDAAIVPKVAASKAPGSPVAGKANVFIFPDLNCGNIAYKIAQRLAKAEAYGPITQGLAKPINDLSRGCSDEDIVGAVAITCVQA---
31 PsiBlast_CBE 80.2046% -76 - C3 -1QZT PTAS_METTE B:[16-328] ---------------NKTIALPETEDIRTLQAAAKILERGIADIVLVGNEADIKALAGDLDLSKAKIV--DPKTYEKK-DEYINAFYELR-KHKGITLENAAEIMSDYVYFAVMMAKLGEVDGVVSGAAHSSSDTLRPAVQIVKTAKGAALASAFFIISVP------DCEYGSDGTFL-----FADSGMVEMPSVEDVANIAVISAKTFE-LLVQDVPKVAMLSYSTKGSAKSKLTEATIASTKLAQELAPDIAI----DGELQVDAAIVPKVAASKAPGSPVAGKANVFIFPDLNCGNIAYKIAQRLAKAEAYGPITQGLAKPINDLSRGCSDEDIVGAVAITCVQA---
29 PsiBlast_CBE 79.1746% -73 - C3 -1QZT PTAS_METTE D:[16-328] ---------------NKTIALPETEDIRTLQAAAKILERGIADIVLVGNEADIKALAGDLDLSKAKIV--DPKTYEKK-DEYINAFYELR-KHKGITLENAAEIMSDYVYFAVMMAKLGEVDGVVSGAAHSSSDTLRPAVQIVKTAKGAALASAFFIISVP------DCEYGSDGTFL-----FADSGMVEMPSVEDVANIAVISAKTFE-LLVQDVPKVAMLSYSTKGSAKSKLTEATIASTKLAQELAPDIAI----DGELQVDAAIVPKVAASKAPGSPVAGKANVFIFPDLNCGNIAYKIAQRLAKAEAYGPITQGLAKPINDLSRGCSDEDIVGAVAITCVQA---
7 PsiBlast_PDB 79.1046% -70 - C3 -2AF3 PTAS_METTE C:[16-328] ---------------NKTIALPETEDIRTLQAAAKILERGIADIVLVGNEADIKALAGDLDLSKAKIV--DPKTYEKK-DEYINAFYELR-KHKGITLENAAEIMSDYVYFAVMMAKLGEVDGVVSGAAHSSSDTLRPAVQIVKTAKGAALASAFFIISVP------DCEYGSDGTFL-----FADSGMVEMPSVEDVANIAVISAKTFE-LLVQDVPKVAMLSYSTKGSAKSKLTEATIASTKLAQELAPDIAI----DGELQVDAAIVPKVAASKAPGSPVAGKANVFIFPDLNCGNIAYKIAQRLAKAEAYGPITQGLAKPINDLSRGCSDEDIVGAVAITCVQA---
28 PsiBlast_CBE 78.7046% -71 * C3 *2AF3 PTAS_METTE D:[16-328] ---------------NKTIALPETEDIRTLQAAAKILERGIADIVLVGNEADIKALAGDLDLSKAKIV--DPKTYEKK-DEYINAFYELR-KHKGITLENAAEIMSDYVYFAVMMAKLGEVDGVVSGAAHSSSDTLRPAVQIVKTAKGAALASAFFIISVP------DCEYGSDGTFL-----FADSGMVEMPSVEDVANIAVISAKTFE-LLVQDVPKVAMLSYSTKGSAKSKLTEATIASTKLAQELAPDIAI----DGELQVDAAIVPKVAASKAPGSPVAGKANVFIFPDLNCGNIAYKIAQRLAKAEAYGPITQGLAKPINDLSRGCSDEDIVGAVAITCVQA---
8 PsiBlast_PDB 77.8642% -75 - C3 -1VMI EUTD_ECOLI A:[28-332] -----------------RVVFPDALDQRVLKAAQYLHQQGLATPILVANPFELRQFALSHGVAMDGLQVIDPHGNLAM-REEFAHRWLAR-AGEK-TPPDALEKLTDPLMFAAAMVSAGKADVCIAGNLSSTANVLRAGLRIIGLQPGCKTLSSIFLML---------PQY------SGPALGFADCSVVPQPTAAQLADIALASAETWRAITGEE-PRVAMLSFSSNGSARHPCVANVQQATEIVRERAPKLVV----DGELQFDAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIGYKIAQRLGGYRAVGPLIQGLAAPMHDLSRGCSVQEIIELALVAA------