@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : Rv0565c: (2016-04-23 )
MSVTPNAGCVDVVIVGAGISGLGAAYRIIERNPQLTYTILERRARIGGTWDLFRYPGVRSDSSIFTLSFPYEPWTREEGIADGAHIREYLTDMAHKYGIDRHIEFNSYVRAADWDSSTDTWTVTFEQNGVHKHYRSRFVFFGSGYYNYDEGYTPDFGGIEKFGGAVVHPQHWPEDLDYTGKKIVVIGSGATAVTLIPSLTDRAEKVTMLQRSPTYLISASKYSTFAAVVRKALPPKTSHLIVRMYNALLEAVFWFLSRKTPVFVKWLLRRTAIKNLPEGYDIETHFTPRYNPWDQRLCLIPDADLYNAITSGRAEVVTDHIDHFDATGIALKSGGHLDADIIVTATGLQLQALGGAAISLDGVEIDPRDRFVYKAHMLEDVPNLFWCVGYTNASWTLRADMTARATAKLLAHMAAHGHTRAAPHLGDEPMDEKPSWDIQAGYVKRAPYALPKSGTKRPWNVRQNYLADAIDYRFDRIEEAMVFGAA
Atome Classification :
(20 SA)
.........10........20........30..-.---.....40........50.-.---------------.---------------------------------.....60-.--..-----......-----70.---.-----.-----..-----...80........90........100.......110.......120......---.--130.......140.......150.......160----.......170.-..-------....180.......190.......200.......210.......220.....---.-------------.230----------..------------------------------....--------------.-----------240--....-----------------------.--------.----.--..250--------.------------.....---.-----.--.260.......270.......280......-.290.......300.......310.....---.---.320....--...330.....-..340......-----.350.-.--.....---360------....--..---.370.......380.......390--..----.-......400.......410.......420.......430.......440.......450.......460.-----------------.-----------------.....470.......480....-----
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MSVTPNAG
C
V
D
V
V
I
VGAGIS
G
L
G
A
A
Y
R
I
IERNP-Q---
L
T
Y
T
I
L
E
R
R
A
RIGGTWDL-F---------------R---------------------------------YPGVRS--D--S
S
-----
I
F
T
L
SF-----PYE---P-----W-----TR-----EEGIA
D
G
A
H
I
R
E
Y
L
T
D
M
A
H
KYGIDRHIEFN
S
Y
V
RAADWDSST
D
T
W
T
V
T
F
EQN---
G
--
V
H
K
H
Y
R
S
R
F
V
F
F
GS
G
Y
YNYDEGYTPDFG
G
I
E
K
F----G
G
A
VVHPQHWP-ED-------LDYTG
K
K
I
V
V
IGSG
A
T
A
V
T
LIPSLTD
R
A
E
K
V
T
MLQRSP
T
Y
L
I
SASK
Y
S
T
F
A
A
---
V
-------------
V
R
K
A----------LP------------------------------PK
T
S
--------------
H
-----------
L
----
I
V
R
M
-----------------------
Y
--------
N
----
A
--
L
L
E
----------
A
------------
V
F
W
F
L
---S-----R--K
T
P
V
F
V
K
W
L
L
R
R
T
A
I
KNLPEGYDIE
T
H
FTP-RYNP
W
D
Q
R
L
C
LIP
D
A
D
L
Y
N
A
I
TSG
R
A
E
V
V
---
T
---
D
H
IDHFDA--T
G
I
A
LKSGGHL-
D
A
D
I
I
V
T
ATG
L
-----
Q
L
Q
AL-G--
G
A
A
I
S
---LD
G
------
V
EID--PR---D
R
F
V
Y
K
A
H
M
L
E
DVPN
L
F
W
C
V
GY----TN----A-
S
W
T
L
R
A
D
M
T
A
R
A
T
A
K
L
L
A
H
M
A
AHGHTRAAPHLGDEPMDEKPSWDIQA
G
Y
VKRAPYALPKSGTKRPW
N
V
R
Q
-----------------
N
-----------------
Y
L
A
D
A
I
D
Y
R
F
D
R
I
E
E
A
M
VFGAA-----
124
HHSearch
91.27
24%
-92
- C3 -
3UOX
1
OTEMO_PSEPU
A:
[6-503]
-----
K
S
P
A
L
D
A
V
V
I
G
A
G
V
T
G
I
Y
Q
A
F
L
I
N
Q
A
---
G
---
M
K
V
L
G
I
E
A
G
E
D
V
G
G
T
W
Y
W
-
N
---------------
R
---------------------------------
Y
P
G
C
R
L
--
D
--
T
E
-----
S
Y
A
Y
G
Y
-----
F
A
L
---
K
GIIPE
W
-----
E
W
-----
S
E
N
F
A
S
Q
P
E
M
L
R
Y
V
N
R
A
A
D
A
M
D
V
R
K
H
Y
R
F
N
T
R
V
T
A
A
R
Y
V
E
N
D
R
L
W
E
V
T
L
D
N
E
--------
E
V
V
T
C
R
F
L
I
S
A
T
G
P
L
--
S
A
---
P
D
I
K
G
I
D
S
F
----
K
G
E
S
F
H
S
S
R
W
P
-
T
D
AEGAPKG
V
D
F
T
G
K
R
V
G
V
I
G
T
G
A
T
G
V
Q
I
I
P
I
A
A
E
T
A
K
E
L
Y
V
F
Q
R
T
P
N
W
C
T
P
L
G
N
S
P
M
S
K
E
K
M
D
S
-------------
L
R
N
R
----------
Y
P
------------------------------
T
I
L
E
--------------
Y
V
K
S
TDTAFPYH
R
----
D
P
R
K
-----------------------
G
TDVS
E
S
E
R
D
----
A
--
F
F
E
----------
E
L
Y
R
QPGYGIWLS
G
F
R
D
L
LL-
N
-----
K
--
E
S
N
K
F
L
A
D
F
V
A
K
K
I
R
Q
R
V
K
-
D
P
V
V
A
E
K
L
I
P
K
D
H
P
F
G
A
K
R
V
P
--
M
E
T
N
Y
Y
E
T
Y
N
R
D
N
V
H
L
V
---
D
IRE
A
P
I
Q
E
V
T
P
--
E
G
I
K
T
A
D
A
-
A
Y
-
D
L
D
V
I
I
Y
A
T
G
F
-----
D
A
V
T
G
-
S
LD
R
I
D
I
R
G--
K
D
N
------
V
R
L
I
D
A
W
A
E--
G
P
S
T
Y
L
G
L
Q
A
R
G
F
P
N
F
F
T
L
V
G
P
----
H
N
GSTF
C
-
N
V
G
V
C
G
G
L
Q
A
E
W
V
L
R
M
I
S
Y
M
K
D
N
G
F
T
Y
S
E
P
T
Q
A
----
A
E
N
R
W
T
E
E
V
Y
A
D
F
S
R
T
----
L
L
A
-
E
A
N
A
W
W
V
----------------------------------------------------------------
125
HHSearch
90.34
26%
-93
- C3 -
4AP3
4
?
A:
[20-515]
-------
T
S
Y
D
V
V
V
V
G
A
G
I
A
G
L
Y
A
I
H
R
F
R
S
Q
---
G
---
L
T
V
R
A
F
E
A
A
S
G
V
G
G
V
W
Y
W
-
N
---------------
R
---------------------------------
Y
P
G
A
R
C
--
D
--
V
E
-----
S
I
D
Y
S
Y
-----
S
F
S
---
P
-----
E
L
E
Q
E
W
N
W
-----
S
E
K
Y
A
T
Q
P
E
I
L
A
Y
L
E
H
V
A
D
R
F
D
L
R
R
D
I
R
F
D
T
R
V
T
S
A
V
L
D
E
E
G
L
R
W
T
V
R
T
D
R
G
--------
D
E
V
S
A
R
F
L
V
V
A
A
G
P
L
--
S
N
A
N
T
P
A
F
D
G
L
D
R
F
----
T
G
D
I
V
H
T
A
R
W
P
-
H
D
G------
V
D
F
T
G
K
R
V
G
V
I
G
T
G
S
S
G
I
Q
S
I
P
I
I
A
E
Q
A
E
Q
L
F
V
F
Q
R
S
A
N
Y
S
I
P
A
G
----
D
D
A
---
T
R
A
E
Q
K
A
N
Y
A
E
R
R
R
L
S
R
E
SGGGSPHRP-
H
P
------------------------------
K
S
A
L
--------------
E
VS
E
E
E
------
R
R
A
V
Y
E
E
R
W
-----------------------
K
--------
L
----
G
G
V
L
F
S
----------
K
------------
A
F
P
D
Q
---
L
-----
T
D
P
A
A
N
D
T
A
R
A
F
W
E
E
K
I
R
A
V
V
-
D
D
P
A
V
A
E
L
L
T
P
K
D
H
A
I
G
A
K
R
I
V
--
L
D
S
G
Y
Y
E
T
Y
N
R
D
N
V
E
L
V
---
D
LRS
T
P
I
V
G
M
D
E
--
T
G
I
V
T
-
T
G
A
H
Y
-
D
L
D
M
I
V
L
A
T
G
F
-----
D
A
M
T
G
S
L
D
-
K
L
E
I
V
G
--
R
G
G
------
R
T
L
K
E
T
W
A
A--
G
P
R
T
Y
L
G
L
G
I
D
G
F
P
N
F
F
N
L
T
G
P
----
G
S
PSVL
A
-
N
M
V
L
H
S
E
L
H
V
D
W
V
A
D
A
I
A
Y
L
D
A
R
G
A
A
G
I
E
G
T
P
E
----
A
V
A
D
W
V
E
E
C
R
N
R
A
E
A
S
----
L
L
N
-
S
A
N
S
W
Y
L
G
A
--------------------------------------------------------------
122
HHSearch
88.48
23%
-98
- C3 -
1W4X
2
PAMO_THEFY
A:
[11-538]
---
R
Q
P
P
E
E
V
D
V
L
V
V
G
A
G
F
S
G
L
Y
A
L
Y
R
L
R
E
L
---
G
---
R
S
V
H
V
I
E
T
A
G
D
V
G
G
V
W
Y
W
-
N
---------------
R
---------------------------------
Y
P
G
A
R
C
--
D
--
I
E
-----
S
I
E
Y
C
Y
-----
S
F
S
---
E
E
V
L
Q
E
W
-----
N
W
-----
T
E
R
Y
A
S
Q
P
E
I
L
R
Y
I
N
F
V
A
D
K
F
D
L
R
S
G
I
T
F
H
T
T
V
T
A
A
A
F
D
E
A
T
N
T
W
T
V
D
T
N
H
G
--------
D
R
I
R
A
R
Y
L
I
M
A
S
G
Q
L
--
S
V
P
Q
L
P
N
F
P
G
L
K
D
F
----
A
G
N
L
Y
H
T
G
N
W
P
-
H
E
P------
V
D
F
S
G
Q
R
V
G
V
I
G
T
G
S
S
G
I
Q
V
S
P
Q
I
A
K
Q
A
A
E
L
F
V
F
Q
R
T
P
H
F
A
V
P
A
R
N
A
P
L
D
P
E
---
F
L
A
D
----------
L
K
K
R
Y
A
E
F
R
E
E
S
R
N
T
P
------------------------------
G
G
T
H
RYQGPKSALEVS
D
E
E
-----------
L
----
V
E
T
L
-----------------------
E
--------
R
----
Y
--
W
Q
E
GGP-------
D
------------
I
L
A
A
Y
RDI
L
-----
R
D
R
D
A
N
E
R
V
A
E
F
I
R
N
K
I
R
N
T
V
-
R
D
P
E
V
A
E
R
L
V
P
K
G
Y
P
F
G
T
K
R
L
I
--
L
E
I
D
Y
Y
E
M
F
N
R
D
N
V
H
L
V
---
D
TLS
A
P
I
E
T
I
T
P
--
R
G
V
R
T
S
E
-
R
E
Y
-
E
L
D
S
L
V
L
A
T
G
F
-----
D
A
L
T
G
-
A
L
F
K
I
D
I
R
G--
V
G
N
------
V
A
L
K
E
K
W
A
A--
G
P
R
T
Y
L
G
L
S
T
A
G
F
P
N
L
F
F
I
A
G
P
----
G
S
PSAL
S
-
N
M
L
V
S
I
E
Q
H
V
E
W
V
T
D
H
I
A
Y
M
F
K
N
G
L
T
R
S
E
A
V
L
E
----
K
E
D
E
W
V
E
H
V
N
E
I
A
D
E
T
----
L
Y
P
-
M
T
A
S
W
Y
T
G
A
NVPG
K
P
R
V
F
MLYVGG
F
H
R
-----------------
Y
R
Q
I
C
D
E
V
A
A
K
G
Y
E
G
------------
112
Fugue
88.09
22%
-92
- C3 -
1W4X
2
PAMO_THEFY
A:
[10-542]
--
R
R
Q
P
P
E
E
V
D
V
L
V
V
G
A
G
F
S
G
L
Y
A
L
Y
R
L
R
E
L
G
------
R
S
V
H
V
I
E
T
A
G
D
V
G
G
V
W
Y
W
-
N
---------------
R
---------------------------------
Y
P
G
A
R
C
--
D
--
I
E
-----
S
I
E
Y
C
Y
SFS
E
E
V
L
Q
---
E
-----
W
-----
N
W
-----
T
E
R
Y
A
S
Q
P
E
I
L
R
Y
I
N
F
V
A
D
K
F
D
L
R
S
G
I
T
F
H
T
T
V
T
A
A
A
F
D
E
A
T
N
T
W
T
V
D
T
N
H
G
--------
D
R
I
R
A
R
Y
L
I
M
A
S
G
Q
L
S
--
V
P
Q
L
P
N
F
P
G
L
K
D
F
----
A
G
N
L
Y
H
T
G
N
W
P
H
E
P
-------
V
D
F
S
G
Q
R
V
G
V
I
G
T
G
S
S
G
I
Q
V
S
P
Q
I
A
K
Q
A
A
E
L
F
V
F
Q
R
T
P
H
F
A
V
P
A
R
N
A
P
L
D
P
E
---
F
-------------
L
A
D
L
----------
K
K
R
Y
A
E
F
R
E
E
S
R
N
TPGGTHRYQGPKSALEVS
D
E
E
L
V
--------------
E
-----------
T
----
L
E
R
Y
-----------------------
W
--------
Q
E
GGP
D
--
I
L
A
----------
A
------------
Y
R
D
I
L
---
R
-----
D
--
R
D
A
N
E
R
V
A
E
F
I
R
N
K
I
R
N
T
V
R
D
P
E
V
A
E
R
L
V
P
-
K
G
Y
P
F
G
T
K
R
L
I
L
E
I
-
D
Y
Y
E
M
F
N
R
D
N
V
H
L
V
D
TL
S
---
A
P
I
E
T
I
T
P
--
R
G
V
R
T
-
S
E
R
E
Y
-
E
L
D
S
L
V
L
A
T
G
F
-----
D
A
L
T
G
-
A
--
L
F
K
I
D
---
I
R
G
VGNVA
L
K
E
K
W
--
A
A
---
G
P
R
T
Y
L
G
L
S
T
A
G
F
P
N
L
F
F
I
A
G
P
GSPS
A
L
----
S
-
N
M
L
V
S
I
E
Q
H
V
E
W
V
T
D
H
I
A
Y
M
F
K
N
G
L
T
R
S
E
A
V
L
E
K
E
D
E
W
V
E
H
V
N
E
I
A
D
E
T
L
Y
P
M
T
A
S
W
Y
T
G
A
N
V
P
G
K
P
R
V
F
-----------------
M
-----------------
L
Y
V
G
G
F
H
R
Y
R
Q
I
C
D
E
V
A
A
K
G
Y
E
GFVLT
123
HHSearch
87.58
21%
-87
- C3 -
4RG3
4
?
A:
[14-537]
------
T
H
T
V
D
A
V
V
I
G
A
G
F
G
G
I
Y
A
V
H
K
L
H
H
E
L
--
G
---
L
T
T
V
G
F
D
K
A
D
G
P
G
G
T
W
Y
W
-
N
---------------
R
---------------------------------
Y
P
G
A
L
S
--
D
--
T
E
-----
S
H
L
Y
R
F
-----
S
F
D
---
R
-----
D
L
L
Q
E
S
T
W
-----
K
T
T
Y
I
T
Q
P
E
I
L
E
Y
L
E
D
V
V
D
R
F
D
L
R
R
H
F
K
F
G
T
E
V
T
S
A
L
Y
L
D
D
E
N
L
W
E
V
T
T
D
H
G
--------
E
V
Y
R
A
K
Y
V
V
N
A
V
G
L
L
--
S
A
I
N
F
P
N
L
P
G
L
D
T
F
----
E
G
E
T
I
H
T
A
A
W
P
-
E
G
-------
K
S
L
A
G
R
R
V
G
V
I
G
T
G
S
T
G
Q
Q
V
I
T
S
L
A
P
E
V
E
H
L
T
V
F
V
R
T
P
Q
Y
S
V
P
V
G
N
R
P
V
N
P
E
---
Q
-------------
I
A
E
-----------
I
K
------------------------------
A
D
Y
D
--------------
R
-----------
I
----
W
E
R
A
K
N
SAVAFGFEESTLPAMSVS
E
E
E
R
--------
N
----
R
--
I
F
Q
E
A
W
D
H
GG
G
F
R
F
------------
M
F
G
T
F
---
G
DIATD
E
--
A
A
N
E
A
A
A
S
F
I
R
A
K
V
A
E
I
I
-
E
D
P
E
T
A
R
K
L
M
P
-
K
G
-
L
F
A
K
R
P
L
--
C
D
S
G
Y
Y
E
V
Y
N
R
P
N
V
E
A
V
---
A
IKE
N
P
I
R
E
V
T
A
--
K
G
V
V
T
E
D
G
V
L
H
-
E
L
D
V
L
V
F
A
T
G
F
-----
D
A
V
D
G
N
Y
R
-
R
I
E
I
R
G--
R
D
G
------
L
H
I
N
D
H
W
D
G
--
Q
P
T
S
Y
L
G
V
S
T
A
N
F
P
N
W
F
M
V
L
G
P
----
N
G
PF--
T
-
N
L
P
P
S
I
E
T
Q
V
E
W
I
S
D
T
I
G
Y
A
E
R
N
G
V
R
A
I
E
P
T
P
E
----
A
E
A
E
W
T
E
T
C
T
E
I
A
N
A
T
----
L
F
T
-
K
G
D
S
W
I
F
G
A
-----------------
N
IPG
K
K
P
S
VLFYLGG
L
R
N
Y
R
A
V
M
A
E
V
A
A
D
G
Y
R
G
------------
114
Fugue
74.68
21%
-95
- C3 -
4USR
2
?
A:
[1-357]
--
G
P
A
M
P
P
I
L
D
V
I
V
I
G
G
G
Q
A
A
L
T
T
A
Y
F
L
R
--
R
T
-
S
---
L
S
Y
L
L
L
D
E
Q
P
G
P
G
G
A
W
L
H
A
W
---------------
D
---------------------------------
S
L
R
L
F
S
--
P
--
A
A
-----
W
S
S
I
A
G
-----
W
P
M
---
P
-----
S
-----
P
T
-----
E
P
G
N
P
T
R
N
D
V
I
D
Y
L
R
R
Y
E
D
R
Y
----
Q
F
P
I
Q
R
P
V
R
V
D
T
V
T
R
L
D
D
L
W
R
V
Q
A
G
D
---------
Q
Q
W
L
A
R
A
V
I
S
A
T
G
--
T
W
S
K
P
F
I
P
P
Y
E
G
R
E
L
F
----
Q
G
A
Q
I
H
S
A
H
Y
R
-
T
P
-------
A
P
F
A
G
K
R
V
M
V
V
G
G
G
N
S
G
A
Q
V
L
A
E
L
S
S
V
S
E
T
L
W
I
T
Q
E
P
P
A
F
L
-------------------------------------------
P
------------------------------
D
E
V
D
--------------
G
--------------------------------------------------------------------------------------------------------------
R
V
L
F
E
R
A
T
A
R
W
K
A
Q
Q
E
G
R
S
I
D
E
P
-
A
G
G
F
G
D
----
I
V
M
V
P
P
V
R
E
A
R
E
R
G
V
L
-
V
A
---
E
---
R
P
F
A
R
F
T
E
--
T
G
V
E
W
A
D
G
R
R
E
-
N
L
D
A
V
I
W
C
S
G
F
RPALD
H
L
R
E
L
-
G
--------------------
V
V
E
--
A
D
---
G
K
V
Q
V
E
D
T
R
V
V
K
Q
P
N
-
L
W
L
V
G
Y
----
G
D
----
W
-
T
G
M
------
A
S
A
T
L
I
G
V
T
R
T
A
R
S
T
A
D
Q
V
V
Q
A
L
T
A
T
P
------------------------------------------------------------------------------------------------
126
HHSearch
70.91
20%
-100
* C3 *
2XVE
1
?
A:
[3-341]
---------
T
R
I
A
I
L
G
A
G
P
S
G
M
A
Q
L
R
A
F
Q
S
A
Q
E
K
G
A
E
I
P
E
L
V
C
F
E
K
Q
A
D
W
G
G
Q
W
N
Y
-
T
WRTGLDENGEPVHSS
M
---------------------------------
Y
R
Y
L
W
S
--
N
--
G
P
-----
K
E
C
L
E
F
-----
A
D
Y
---
T
-----
F
-----
D
E
HFG
K
P
I
A
S
Y
P
P
R
E
V
L
W
D
Y
I
K
G
R
V
E
K
A
G
V
R
K
Y
I
R
F
N
T
A
V
R
H
V
E
F
N
E
D
S
Q
T
F
T
V
T
V
Q
D
H
---
T
TD
T
I
Y
S
E
E
F
D
Y
V
V
C
C
T
G
H
F
--
S
T
P
Y
V
P
E
F
E
G
F
E
K
F
----
G
G
R
I
L
H
A
H
D
F
R
-
D
A
-------
L
E
F
K
D
K
T
V
L
L
V
G
S
S
Y
S
A
E
D
I
G
S
Q
C
Y
K
Y
G
A
K
K
L
I
S
C
Y
R
T
A
P
M
-------------------------------------------
G
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
-
K
W
P
-----------
E
N
W
----
D
------
E
---
R
---
P
N
L
V
R
V
D
T
--
E
N
A
Y
F
A
D
G
S
S
E
-
K
V
D
A
I
I
L
C
T
G
Y
-----
I
H
H
F
P
-
F
---
L
N
D
D
---
L
-
R
------
L
V
T
N
--
N
R
LW-
P
L
N
L
Y
K
G
V
V
W
E
D
N
P
K
F
F
-
Y
I
G
M
----
Q
D
----
Q
W
Y
S
F
N
M
F
D
A
Q
A
W
Y
A
R
D
V
I
M
G
R
L
P
--------------------------------------------------------------------------------------------------------------
127
HHSearch
68.37
21%
-98
- C3 -
2GV8
4
FMO1_SCHPO
A:
[3-361]
-----
L
P
T
I
R
K
I
A
I
I
G
A
G
P
S
G
L
V
T
A
K
A
L
L
A
E
K
A
-
F
---
D
Q
V
T
L
F
E
R
R
G
S
P
G
G
V
W
N
Y
-
T
---------------
S
TLSNKLPVPSTNPI
L
T
T
E
P
IVGPAAL
P
V
Y
P
S
PL
Y
R
D
L
Q
T
--
N
--
T
P
-----
I
E
L
M
G
Y
-----
C
D
Q
---
S
-----
F
-----
K
P
Q----
T
L
Q
F
P
H
R
H
T
I
Q
E
Y
Q
R
I
Y
A
Q
P
L
L
P
F
--
I
K
L
A
T
D
V
L
D
I
E
K
K
--
D
G
S
W
V
V
T
Y
K
G
T
KAG
S
--
P
I
S
K
D
I
F
D
A
V
S
I
C
N
G
H
Y
--
E
V
P
Y
I
P
N
I
K
G
L
D
E
Y
A
K
A
V
P
G
S
V
L
H
S
S
L
F
R
-
E
P
-------
E
L
F
V
G
E
S
V
L
V
V
G
G
A
S
S
A
N
D
L
V
R
H
L
T
P
V
A
K
H
P
I
Y
Q
S
L
L
G
G
----------------------------------------------------------------------------
G
-----------------------------------------------------------------------------------------------------------------------------------------------
D
----
I
------------------------
Q
N
E
S
L
Q
Q
V
-------
P
E
I
T
K
F
D
P
TT
R
E
I
Y
L
K
G
G
K
V
L
S
N
I
D
R
V
I
Y
C
T
G
Y
-----
L
Y
S
V
P
-
F
---
P
S
L
A
K
LK
S
P
E
------
T
K
L
I
--
D
D
GSH
V
H
N
V
Y
Q
H
I
F
Y
I
P
D
P
T
L
A
-
F
V
G
L
----
A
L
H---
V
-
V
P
F
P
T
S
Q
A
Q
A
A
F
L
A
R
V
W
S
G
R
L
---------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
65.54
34%
-95
- C2 -
4AP1
3
?
A:
[23-239]
----------
D
V
V
V
V
G
A
G
I
A
G
L
Y
A
I
H
R
F
--
R
S
Q
-
G
---
L
T
V
R
A
F
E
A
A
S
G
V
G
G
V
W
Y
W
-
N
---------------
R
---------------------------------
Y
P
G
A
R
C
--
D
--
V
E
-----
S
I
D
Y
S
Y
-----
S
F
S
---
P
E
L
E
Q
E
W
-----
N
W
-----
S
E
K
Y
A
T
Q
P
E
I
L
A
Y
L
E
H
V
A
D
R
F
D
L
R
R
D
I
R
F
D
T
R
V
T
S
A
V
L
D
E
E
G
L
R
W
T
V
R
T
D
R
G
--------
D
E
V
S
A
R
F
L
V
V
A
A
G
P
L
S
--
N
A
N
T
P
A
F
D
G
L
D
R
F
----
T
G
D
I
V
H
T
A
R
W
P
-
H
D
G------
V
D
F
T
G
K
R
V
G
V
I
G
T
G
S
S
G
I
Q
S
I
P
I
I
A
E
Q
A
E
Q
L
F
V
F
Q
R
S
A
N
Y
S
I
P
A
G
N
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
65.16
32%
-103
- C2 -
1W4X
2
PAMO_THEFY
A:
[17-225]
---------
V
D
V
L
V
V
G
A
G
F
S
G
L
Y
A
L
Y
R
L
--
R
E
L
-
G
---
R
S
V
H
V
I
E
T
A
G
D
V
G
G
V
W
Y
W
-
N
---------------
R
---------------------------------
Y
P
G
A
R
C
--
D
IE
S
I
-----
E
Y
C
Y
S
F
-----
S
E
E
V
L
Q
E
-----
W
-----
N
W
-----
T
E
R
Y
A
S
Q
P
E
I
L
R
Y
I
N
F
V
A
D
K
F
D
L
R
S
G
I
T
F
H
T
T
V
T
A
A
A
F
D
E
A
T
N
T
W
T
V
D
T
N
H
G
--------
D
R
I
R
A
R
Y
L
I
M
A
S
G
Q
L
S
V
P
Q
--
L
P
N
F
P
G
L
K
D
F
----
A
G
N
L
Y
H
T
G
N
W
P
H
E
P
-------
V
D
F
S
G
Q
R
V
G
V
I
G
T
G
S
S
G
I
Q
V
S
P
Q
I
A
K
Q
A
A
E
L
F
V
F
Q
R
T
P
H
F
A
V
P
A
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
PsiBlast_PDB
64.27
32%
-97
- C2 -
2YLX
2
PAMO_THEFY
A:
[17-225]
---------
V
D
V
L
V
V
G
A
G
F
S
G
L
Y
A
L
Y
R
L
--
R
E
L
-
G
---
R
S
V
H
V
I
E
T
A
G
D
V
G
G
V
W
Y
W
-
N
---------------
R
---------------------------------
Y
P
G
A
R
C
AI
E
--
S
I
-----
E
Y
C
Y
S
F
-----
S
E
E
V
L
Q
E
-----
W
-----
N
W
-----
T
E
R
Y
A
S
Q
P
E
I
L
R
Y
I
N
F
V
A
D
K
F
D
L
R
S
G
I
T
F
H
T
T
V
T
A
A
A
F
D
E
A
T
N
T
W
T
V
D
T
N
H
G
--------
D
R
I
R
A
R
Y
L
I
M
A
S
G
Q
L
S
V
P
Q
--
L
P
N
F
P
G
L
K
D
F
----
A
G
N
L
Y
H
T
G
N
W
P
H
E
P
-------
V
D
F
S
G
Q
R
V
G
V
I
G
T
G
S
S
G
I
Q
V
S
P
Q
I
A
K
Q
A
A
E
L
F
V
F
Q
R
T
P
H
F
A
V
P
A
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
PsiBlast_PDB
64.13
29%
-102
- C2 -
3UOY
2
OTEMO_PSEPU
A:
[6-224]
-----
K
S
P
A
L
D
A
V
V
I
G
A
G
V
T
G
I
Y
Q
A
F
L
I
N
Q
A
G
------
M
K
V
L
G
I
E
A
G
E
D
V
G
G
T
W
Y
W
-
N
---------------
R
---------------------------------
Y
P
G
C
R
L
--
D
--
T
E
SYAYG
Y
F
A
L
K
G
-----
I
I
P
---
E
-----
W
-----
E
W
-----
S
E
N
F
A
S
Q
P
E
M
L
R
Y
V
N
R
A
A
D
A
M
D
V
R
K
H
Y
R
F
N
T
R
V
T
A
A
R
Y
V
E
N
D
R
L
W
E
V
T
L
D
N
E
---
E
--
V
---
V
T
C
R
F
L
I
S
A
T
G
P
L
S
A
S
R
--
M
P
D
I
K
G
I
D
S
F
----
K
G
E
S
F
H
S
S
R
W
P
-
T
D
AEGAPKG
V
D
F
T
G
K
R
V
G
V
I
G
T
G
A
T
G
V
Q
I
I
P
I
A
A
E
T
A
K
E
L
Y
V
F
Q
R
T
P
N
W
C
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
64.10
34%
-89
- C2 -
4AOX
4
?
A:
[23-240]
----------
D
V
V
V
V
G
A
G
I
A
G
L
Y
A
I
H
R
F
--
R
S
Q
-
G
---
L
T
V
R
A
F
E
A
A
S
G
V
G
G
V
W
Y
W
-
N
---------------
R
---------------------------------
Y
P
G
A
R
C
--
D
--
V
E
-----
S
I
D
Y
S
Y
-----
S
F
S
---
P
E
L
E
Q
E
W
-----
N
W
-----
S
E
K
Y
A
T
Q
P
E
I
L
A
Y
L
E
H
V
A
D
R
F
D
L
R
R
D
I
R
F
D
T
R
V
T
S
A
V
L
D
E
E
G
L
R
W
T
V
R
T
D
R
G
--------
D
E
V
S
A
R
F
L
V
V
A
A
G
P
L
S
--
N
A
N
T
P
A
F
D
G
L
D
R
F
----
T
G
D
I
V
H
T
A
R
W
P
-
H
D
G------
V
D
F
T
G
K
R
V
G
V
I
G
T
G
S
S
G
I
Q
S
I
P
I
I
A
E
Q
A
E
Q
L
F
V
F
Q
R
S
A
N
Y
S
I
P
A
G
N
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
63.73
32%
-98
- C2 -
2YLR
2
PAMO_THEFY
A:
[17-225]
---------
V
D
V
L
V
V
G
A
G
F
S
G
L
Y
A
L
Y
R
L
--
R
E
L
-
G
---
R
S
V
H
V
I
E
T
A
G
D
V
G
G
V
W
Y
W
-
N
---------------
R
---------------------------------
Y
P
G
A
R
C
--
D
IE
S
I
-----
E
Y
C
Y
S
F
-----
S
E
E
V
L
Q
E
-----
W
-----
N
W
-----
T
E
R
Y
A
S
Q
P
E
I
L
R
Y
I
N
F
V
A
D
K
F
D
L
R
S
G
I
T
F
H
T
T
V
T
A
A
A
F
D
E
A
T
N
T
W
T
V
D
T
N
H
G
--------
D
R
I
R
A
R
Y
L
I
M
A
S
G
Q
L
S
V
P
Q
--
L
P
N
F
P
G
L
K
D
F
----
A
G
N
L
Y
H
T
G
N
W
P
H
E
P
-------
V
D
F
S
G
Q
R
V
G
V
I
G
T
G
S
S
G
I
Q
V
S
P
Q
I
A
K
Q
A
A
E
L
F
V
F
Q
R
T
P
H
F
A
V
P
A
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
63.43
32%
-98
- C2 -
4C74
2
PAMO_THEFY
A:
[17-225]
---------
V
D
V
L
V
V
G
A
G
F
S
G
L
Y
A
L
Y
R
L
--
R
E
L
-
G
---
R
S
V
H
V
I
E
T
A
G
D
V
G
G
V
W
Y
W
-
N
---------------
R
---------------------------------
Y
P
G
A
R
C
--
D
IE
S
I
-----
E
Y
C
Y
S
F
-----
S
E
E
V
L
Q
E
-----
W
-----
N
W
-----
T
E
R
Y
A
S
Q
P
E
I
L
R
Y
I
N
F
V
A
D
K
F
D
L
R
S
G
I
T
F
H
T
T
V
T
A
A
A
F
D
E
A
T
N
T
W
T
V
D
T
N
H
G
--------
D
R
I
R
A
R
Y
L
I
M
A
S
G
Q
L
S
V
P
Q
--
L
P
N
F
P
G
L
K
D
F
----
A
G
N
L
Y
H
T
G
N
W
P
H
E
P
-------
V
D
F
S
G
Q
R
V
G
V
I
G
T
G
S
S
G
I
Q
V
S
P
Q
I
A
K
Q
A
A
E
L
F
V
F
Q
R
T
P
H
F
A
V
P
A
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
63.04
32%
-95
- C2 -
2YM1
4
PAMO_THEFY
A:
[17-225]
---------
V
D
V
L
V
V
G
A
G
F
S
G
L
Y
A
L
Y
R
L
--
R
E
L
-
G
---
R
S
V
H
V
I
E
T
A
G
D
V
G
G
V
W
Y
W
-
N
---------------
R
---------------------------------
Y
P
G
A
R
C
--
D
IE
S
I
-----
E
Y
C
Y
S
F
-----
S
E
E
V
L
Q
E
-----
W
-----
N
W
-----
T
E
R
Y
A
S
Q
P
E
I
L
R
Y
I
N
F
V
A
D
K
F
D
L
R
S
G
I
T
F
H
T
T
V
T
A
A
A
F
D
E
A
T
N
T
W
T
V
D
T
N
H
G
--------
D
R
I
R
A
R
Y
L
I
M
A
S
G
Q
L
S
V
P
Q
--
L
P
-
F
P
G
L
K
D
F
----
A
G
N
L
Y
H
T
G
N
W
P
H
E
P
-------
V
D
F
S
G
Q
R
V
G
V
I
G
T
G
S
S
G
I
Q
V
S
P
Q
I
A
K
Q
A
A
E
L
F
V
F
Q
R
T
P
H
F
A
V
P
A
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
62.92
32%
-98
- C2 -
2YLS
2
PAMO_THEFY
A:
[17-225]
---------
V
D
V
L
V
V
G
A
G
F
S
G
L
Y
A
L
Y
R
L
--
R
E
L
-
G
---
R
S
V
H
V
I
E
T
A
G
D
V
G
G
V
W
Y
W
-
N
---------------
R
---------------------------------
Y
P
G
A
R
C
--
D
IE
S
I
-----
E
Y
C
Y
S
F
-----
S
E
E
V
L
Q
E
-----
W
-----
N
W
-----
T
E
R
Y
A
S
Q
P
E
I
L
R
Y
I
N
F
V
A
D
K
F
D
L
R
S
G
I
T
F
H
T
T
V
T
A
A
A
F
D
E
A
T
N
T
W
T
V
D
T
N
H
G
--------
D
R
I
R
A
R
Y
L
I
M
A
S
G
Q
L
S
V
P
Q
--
L
P
N
F
P
G
L
K
D
F
----
A
G
N
L
Y
H
T
G
N
W
P
H
E
P
-------
V
D
F
S
G
Q
R
V
G
V
I
G
T
G
S
S
G
I
Q
V
S
P
Q
I
A
K
Q
A
A
E
L
F
V
F
Q
R
T
P
H
F
A
V
P
A
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
62.72
32%
-97
- C2 -
4OVI
3
PAMO_THEFY
A:
[17-225]
---------
V
D
V
L
V
V
G
A
G
F
S
G
L
Y
A
L
Y
R
L
--
R
E
L
-
G
---
R
S
V
H
V
I
E
T
A
G
D
V
G
G
V
W
Y
W
-
N
---------------
R
---------------------------------
Y
P
G
A
R
C
--
D
IE
S
I
-----
E
Y
C
Y
S
F
-----
S
E
E
V
L
Q
E
-----
W
-----
N
W
-----
T
E
R
Y
A
S
Q
P
E
I
L
R
Y
I
N
F
V
A
D
K
F
D
L
R
S
G
I
T
F
H
T
T
V
T
A
A
A
F
D
E
A
T
N
T
W
T
V
D
T
N
H
G
--------
D
R
I
R
A
R
Y
L
I
M
A
S
G
Q
L
S
V
P
Q
--
L
P
N
F
P
G
L
K
D
F
----
A
G
N
L
Y
H
T
G
N
W
P
H
E
P
-------
V
D
F
S
G
Q
R
V
G
V
I
G
T
G
S
S
G
I
Q
V
S
P
Q
I
A
K
Q
A
A
E
L
F
V
F
Q
R
T
P
H
F
A
V
P
A
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
PsiBlast_PDB
62.70
32%
-97
- C2 -
4D03
2
PAMO_THEFY
A:
[17-225]
---------
V
D
V
L
V
V
G
A
G
F
S
G
L
Y
A
L
Y
R
L
--
R
E
L
-
G
---
R
S
V
H
V
I
E
T
A
G
D
V
G
G
V
W
Y
W
-
N
---------------
R
---------------------------------
Y
P
G
A
R
D
--
D
IE
S
I
-----
E
Y
C
Y
S
F
-----
S
E
E
V
L
Q
E
-----
W
-----
N
W
-----
T
E
R
Y
A
S
Q
P
E
I
L
R
Y
I
N
F
V
A
D
K
F
D
L
R
S
G
I
T
F
H
T
T
V
T
A
A
A
F
D
E
A
T
N
T
W
T
V
D
T
N
H
G
--------
D
R
I
R
A
R
Y
L
I
M
A
S
G
Q
L
S
V
P
Q
--
L
P
N
F
P
G
L
K
D
F
----
A
G
N
L
Y
H
T
G
N
W
P
H
E
P
-------
V
D
F
S
G
Q
R
V
G
V
I
G
T
G
S
S
G
I
Q
V
S
P
Q
I
A
K
Q
A
A
E
L
F
V
F
Q
R
T
P
H
F
A
V
P
A
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
62.56
32%
-99
- C2 -
4C77
2
PAMO_THEFY
A:
[17-225]
---------
V
D
V
L
V
V
G
A
G
F
S
G
L
Y
A
L
Y
R
L
--
R
E
L
-
G
---
R
S
V
H
V
I
E
T
A
G
D
V
G
G
V
W
Y
W
-
N
---------------
R
---------------------------------
Y
P
G
A
R
C
--
D
IE
S
I
-----
E
Y
C
Y
S
F
-----
S
E
E
V
L
Q
E
-----
W
-----
N
W
-----
T
E
R
Y
A
S
Q
P
E
I
L
R
Y
I
N
F
V
A
D
K
F
D
L
R
S
G
I
T
F
H
T
T
V
T
A
A
A
F
D
E
A
T
N
T
W
T
V
D
T
N
H
G
--------
D
R
I
R
A
R
Y
L
I
M
A
S
G
Q
L
S
V
P
Q
--
L
P
N
F
P
G
L
K
D
F
----
A
G
N
L
Y
H
T
G
N
W
P
H
E
P
-------
V
D
F
S
G
Q
R
V
G
V
I
G
T
G
S
S
G
I
Q
V
S
P
Q
I
A
K
Q
A
A
E
L
F
V
F
Q
R
T
P
H
F
A
V
P
A
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------