@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA0001: (2015-12-17 )
MSVELWQQCVDLLRDELPSQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLGRLLELLGERGEGQLPALSLLIGSKRSRTPRAAIVPSQTHVAPPPPVAPPPAPVQPVSAAPVVVPREELPPVTTAPSVSSDPYEPEEPSIDPLAAAMPAGAAPAVRTERNVQVEGALKHTSYLNRTFTFENFVEGKSNQLARAAAWQVADNLKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEGGQQVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKAEQAKIELPHDAAFFIAQRIRSNVRELEGALKRVIAHSHFMGRPITIELIRESLKDLLALQDKLVSIDNIQRTVAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGVAFGGRDHTTVLHACRKIAQLRESDADIREDYKNLLRTLTT

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70........80-........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200......-------.210.........220.......230.......240.......250.......260-------.......270.--.-.-....280.......290-----..-------.....300..---.---.-----------------.---------..-310.......320.......330.--........340.......350.......360.......370.......-380-........390......-.400.......410.......420..-.....430..------.....440.......450.......---460.......470.......480.......490.......500.......510..
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MSVELWQQCVDLLRDELPSQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLGRLLELLGERGEGQLPALSLLIGSK-RSRTPRAAIVPSQTHVAPPPPVAPPPAPVQPVSAAPVVVPREELPPVTTAPSVSSDPYEPEEPSIDPLAAAMPAGAAPAVRTERNVQVEGALKHTSYLNRTFTFENFVEGKSNQLARAAAWQVADNL-------KH--GYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQ-------LNAINEFKRFY--R-S-VDALLIDDIQFFARKER-----SQ-------EEFFHTFNAL---L---E-----------------G---------GQ-QVILTSDRYPKEIEGLEERLK--S--RFGWGLTVAVEPPELETRVAILMKKAEQAKIELPHDAAFFIAQRIRSN-V-R-ELEGALKRVIAHSHFMG-RPITIELIRESLKDLLALQDKLVSID-NIQRTVAEYY------KIKISDLLSKRRSRSVARPRQVAMA---LSKELTNHSLPEIGVAFGGRDHTTVLHACRKIAQLRESDADIREDYKNLLRTLTT
115 HHSearch 92.9538% -96 - C4 -1L8Q DNAA_AQUAE A:[3-320] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLNPKYTLENFIVGEGNRLAYEVVKEALENL-------GS--LYNPIFIYGSVGTGKTHLLQAAGNEAKKR--GYRVIYSSADDFAQAMVEHLK-------KGTINEFRNMY--K-S-VDLLLLDDVQFLSGKER-----TQ-------IEFFHIFNTL---Y---L-----------------L---------EK-QIILASDRHPQKLDGVSDRLV--S--RFEGGILVEIEL-DNKTRFKIIKEKLKEFNLELRKEVIDYLLEN-TKN-V-R-EIEGKIKLIKLKGFEG----L--ERK----E-----RKERDKLM-QIVEFVANYY------AVKVEDILSDKRNKRTSEARKIAMY---LCRKVCSASLIEIARAFKRKDHTTVIHAIRSVEEEKK--RKFKHLVGFLEKQAFD
22 PsiBlast_CBE 84.0538%-104 - C4 -2Z4R DNAA_THEMA B:[98-335] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LNPDYTFENFVVGPGNSFAYHAALEVA----------KHPGRYNPLFIYGGVGLGKTHLLQSIGNYVVQNEPDLRVMYITSEKFLNDLVDSMK-------EGKLNEFREKY--R-KKVDILLIDDVQFLIGKTG-----VQ-------TELFHTFNEL---H---D-----------------S---------GK-QIVICSDREPQKLSEFQDRLV--S--RFQMGLVAKLEPPDEETRKSIARKMLEIEHGELPEEVLNFVAENVDDN-L-R-RLRGAIIKLLVYKETTG-KEVDLKEAILLLKDFIKP------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 83.4138%-104 - C4 -2Z4R DNAA_THEMA A:[98-335] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LNPDYTFENFVVGPGNSFAYHAALEVA----------KHPGRYNPLFIYGGVGLGKTHLLQSIGNYVVQNEPDLRVMYITSEKFLNDLVDSMK-------EGKLNEFREKY--R-KKVDILLIDDVQFLIGKTG-----VQ-------TELFHTFNEL---H---D-----------------S---------GK-QIVICSDREPQKLSEFQDRLV--S--RFQMGLVAKLEPPDEETRKSIARKMLEIEHGELPEEVLNFVAENVDDN-L-R-RLRGAIIKLLVYKETTG-KEVDLKEAILLLKDFIKP------------------------------------------------------------------------------------------------------------
21 PsiBlast_CBE 83.3538%-103 - C4 -2Z4R DNAA_THEMA C:[98-335] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LNPDYTFENFVVGPGNSFAYHAALEVA----------KHPGRYNPLFIYGGVGLGKTHLLQSIGNYVVQNEPDLRVMYITSEKFLNDLVDSMK-------EGKLNEFREKY--R-KKVDILLIDDVQFLIGKTG-----VQ-------TELFHTFNEL---H---D-----------------S---------GK-QIVICSDREPQKLSEFQDRLV--S--RFQMGLVAKLEPPDEETRKSIARKMLEIEHGELPEEVLNFVAENVDDN-L-R-RLRGAIIKLLVYKETTG-KEVDLKEAILLLKDFIKP------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 82.7338%-105 - C4 -2Z4S DNAA_THEMA A:[98-335] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LNPDYTFENFVVGPGNSFAYHAALEVA----------KHPGRYNPLFIYGGVGLGKTHLLQSIGNYVVQNEPDLRVMYITSEKFLNDLVDSMK-------EGKLNEFREKY--R-KKVDILLIDDVQFLIGKTG-----VQ-------TELFHTFNEL---H---D-----------------S---------GK-QIVICSDREPQKLSEFQDRLV--S--RFQMGLVAKLEPPDEETRKSIARKMLEIEHGELPEEVLNFVAENVDDN-L-R-RLRGAIIKLLVYKETTG-KEVDLKEAILLLKDFIKP------------------------------------------------------------------------------------------------------------
114 HHSearch 79.3530%-102 - C4 -2Z4S DNAA_THEMA A:[96-335] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPLNPDYTFENFVVGPGNSFAYHAALEVAKHP-------G---RYNPLFIYGGVGLGKTHLLQSIGNYVVQNEPDLRVMYITSEKFLNDLVDSMK-------EGKLNEFREKY--RKK-VDILLIDDVQFLIGKTG-----VQ-------TELFHTFNEL---H---D-----------------S---------GK-QIVICSDREPQKLSEFQDRLV--S--RFQMGLVAKLEPPDEETRKSIARKMLEIEHGELPEEVLNFVAENVDDN-L-R-RLRGAIIKLLVYKETTG-KEVDLKEAILLLKDFIKP------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 66.5226% -92 - C4 -3BOS ? A:[51-241] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GVQAIYLWGPVKSGRTHLIHAA---CARANELERRSFYIPLGIHASISTAL--------LEGLEQF-----------DLICIDDVDAVAGHPL-----WE-------EAIFDLYNRV---A---E-----------------Q---------KRGSLIVSASASPMEAGFVLPDLV--S--RMHWGLTYQLQPMMDDEKLAALQRRAAMRGLQLPEDVGRFLLNRMARD-L-R-TLFDVLDRLDKASMVHQ-RKLTIPFVKEMLRL----------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 65.1226% -88 - C4 -3SC3 ? A:[34-224] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GVQAIYLWGPVKSGRTHLIHAA---CARANELERRSFYIPLGIHASISTAL--------LEGLEQF-----------DLICIDDVDAVAGHPL-----WE-------EAIFDLYNRV---A---E-----------------Q---------KRGSLIVSASASPMEAGFVLPDLV--S--RMHWGLTYQLQPMMDDEKLAALQRRAAMRGLQLPEDVGRFLLNRMARD-L-R-TLFDVLDRLDKASMVHQ-RKLTIPFVKEMLRL----------------------------------------------------------------------------------------------------------------
121 HHSearch 60.2321% -86 * C4 *3PFI ? A:[24-251] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RPS-NFDGYIGQESIKKNLNVFIAAAKKR-------NE--CLDHILFSGPAGLGKTTLANIISYEMSAN-----IKTTAAPMIEK--SG------------DLAAILTNL--S-E-GDILFIDEIHRLSPA-------IE-------EVLYPAMEDY---R---L------------------AQTIKIDLPKF-TLIGATTR----AGMLSNPLR--D--RFG--MQFRLEFYKDSELALILQKAALKLNKTCEEKAALEIAKRSRST-P-R-IALRLLKRVRDFADVNDEEIITEKRANEALNSLGVNELGFDAMD-LRYLELLTAA------KQKPIGLASIAAALSEDENTIEDVI---EPYLLANGYIERTAKGRIASAKSYSALKLNYE-----------------------
123 HHSearch 59.9623% -81 - C4 -1HQC RUVB_THET8 A:[10-235] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLDEYIGQERLKQKLRVYLEAAKAR-------KE--PLEHLLLFGPPGLGKTTLAHVIAHELGV-----NLRVTSGPAIEKP--GDL-----------AAILANSL--E-E-GDILFIDEIHRLSRQ-------AE-------EHLYPAMEDF---V---MDIVIGQGPAARTIRLELP---------RF-TLIGATTRP----GLITAPLL--S--RFG--IVEHLEYYTPEELAQGVMRDARLLGVRITEEAALEIGRRSRGT-M-R-VAKRLFRRVRDFAQVAGEEVITRERALEALAALGLDELGLEKRD-REILEVLILR------FGGGPVGLATLATALSEDPGTLEEV---HEPYLIRQGLLKRTPRGRVPTELAYRHLGYPPPV---------------------
109 Fugue 59.4019% -56 - C4 -1HQC RUVB_THET8 A:[5-318] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALRPKTLDEYIGQERLKQKLRVYLEAAKAR-------KE--PLEHLLLFGPPGLGKTTLAHVIAHEL---GVNLRVTSGPAIEKPGDLAAILANSLEEGDILFIDEIHRLS--R-Q-AEEHLYPAMEDFVMDIV-----IG-------QGPAARTIRL---E---L-----------------P---------RF-TLIGATTRPGLITAPLLSR----------FGIVEHLEYYTPEELAQGVMRDARLLGVRITEEAALEIGRRSRGT-M-R-VAKRLFRRVRDFAQVAGEEVITRERALEALAALGLDELGLEKRDREILEVLILRFGGGPVGLATLATALSEDPGTLEEVHEPYLIRQGLLKRTPRGRVPTELAYRHLGYPPPV-------------------------------
3 PsiBlast_PDB 58.1680% -53 - C7 -1J1V A:[1-94] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTID-NIQKTVAEYY------KIKVADLLSKRRSRSVARPRQMAMA---LAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREESHDIKEDFSNLIRTLSS
117 HHSearch 57.8183% -49 - C7 -1J1V A:[2-93] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TID-NIQKTVAEYY------KIKVADLLSKRRSRSVARPRQMAMA---LAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREESHDIKEDFSNLIRTLSS
134 HHSearch 57.8021% -95 - C4 -1IN4 RUVB_THEMA A:[22-230] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KSLDEFIGQENVKKKLSLALEAAKMR-------GE--VLDHVLLAGPPGLGKTTLAHIIASELQTN-----IHVTSGPVLVK--------------QGDMAAILTSL--E-R-GDVLFIDEIHRLNKA-------VE-------ELLYSAIEDF---Q---IDI---------------Q---------PF-TLVGATTR----SGLLSSPLR--S--RFG--IILELDFYTVKELKEIIKRAASLMDVEIEDAAAEMIAKRSRGT-P-R-IAIRLTKRVRDMLTVVK-ADRINTDIVLKTMEVLNIDDEGLDEF-DRKILKTIIE------IYRGGPVGLNALAASLGVEADTLSE---VYEPYLLQAGFLARTPRGRIVTEKAYKHLKYEVP---------------------
128 HHSearch 57.7422% -85 - C4 -1IXZ FTSH_THET8 A:[48-252] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IPKGVLLVGPPGVGKTHLARAVAGEAR-----VPFITASGSDFVEMFVGVGA-------ARVRDLFETAKR-H-A-PCIVFIDEIDAVGR---NDE--RE-------QTLNQLLVEMDGFE---K-----------------D---------TA-IVVMAATNRPDI---LDPALLRPG--RF--DRQIAIDAPDVKGREQILRIHARGKPL-AEDVDLALLAKRTPGF-VGA-DLENLLNEAALLAAREGRRKITMKDLEEAAS-----------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 57.5047% -93 * C5 *2E0G - DNAA_ECOLI A:[1-101] -SLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPNRFVLDWVRDKYLNNINGLLTSFCGADAPQLRFEVGTKPVTQTPQAAVT---SNVAAPAQVAQTQPQR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
124 HHSearch 56.9922% -83 - C4 -1IY2 FTSH_THET8 A:[72-276] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IPKGVLLVGPPGVGKTHLARAVAGEAR-----VPFITASGSDFVEMFVGVGA-------ARVRDLFETAKR-H-A-PCIVFIDEIDAVGRK--NDE--RE-------QTLNQLLVEM---DGFEK-----------------D---------TA-IVVMAATNRP---DILDPALL--RPGRF--DRQIAIDAPDVKGREQILRIHARGKPL-AEDVDLALLAKRTPGFVG-A-DLENLLNEAALLAAREGRRKITMKDLEEAAS-----------------------------------------------------------------------------------------------------------------
106 Fugue 56.5041% -91 - C5 -2E0G - DNAA_ECOLI A:[1-107] -SLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPNRFVLDWVRDKYLNNINGLLTSFCGADAPQLRFEVGTK-PVTQTPQAAVTSNVAAPAQVAQTQPQR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
130 HHSearch 56.3521%-104 - C4 -3B9P A:[53-241] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAKGLLLFGPPGNGKTLLARAVATECS-----ATFLNISAASLTSKYVGDGE-------K-LVRALFAVARHM-Q-PSIIFIDEVDSLLSER--------EASRRLKTEFLVEFDGL---P-------------------------------RI-VVLAATNRP----QELDEAAL--R--RFT--KRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGY-S-GSDLTALAKDAALEPIREL-NISAMRAITEQDFHSSLKRIRRSVAP-QSLNSYEKWS-----------------------------------------------------------------------------------------
131 HHSearch 55.9120% -85 - C4 -2CE7 - FTSH_THEMA A:[11-254] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGAR--MPKGILLVGPPGTGKTLLARAVAGEA-----NVPFFHISGSDFVELFVGVGA-------ARVRDLFAQAKA-H-A-PCIVFIDEIDAVGRH--DEREQTL-------NQLLVEMDGF---D---SK----------------E---------GI-IVMAATNRP----DILDPALL--RPGRFD--KKIVVDPPDMLGRKKILEIHTRNKPL-AEDVNLEIIAKRTPGF-VGA-DLENLVNEAALLAAREGRDKITMKDFEEAIDRVILISPAEKRII-AYHEAGHAVV------STVVPNGEPVHRISIIKYLVSRNEL---LDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWG