@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA0086: (2015-12-21 )
MADPSFASGRLGSRLQGSIAMIAEELLRAGRLDDALKALQEQVRSQPSNATLRIFLFQLLAVMGQWARAQNQLKVVGELDASALPMVQTYSTAIDCEALRREVFAGRLTPVILGQPAEWIAPLLQALSLDAEGHGEAAQALREQAFDAAPAVPGRIGEAPFAWLADADTRLGPVLEVIVNGRYAWLPMSNLRSLKVEAPSDLRDLVWLPAELTLANGGATVALLPARYAETVEHGDDAARLGRKTEWLDSGLPVGQRLFVTDAGETALFDLRELDFEPTDA

Atome Classification :

(20 SA) .........10........20........30........40.......-.---------50......-..60........70..-......80........90---....--------.....100.......110.-......120.----......130.......---.140-.......150....-...160.......170......-.180........190.......200.......210.......220.-.-.....230.......240.......250----........260.-......270.......280-
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MADPSFASGRLGSRLQGSIAMIAEELLRAGRLDDALKALQEQVRSQPS-N---------ATLRIFLF-QLLAVMGQWARAQNQL-KVVGELDASALPMVQTY----STAI--------DCEALRREVFAGRLTPVIL-GQPAEWIAPL----LQALSLD-AEGHGEAA---QALR-EQAFDAAPAVPGRI-GEAPFAWLADADTRLGPVLEVI-VN-GRYAWLPMSNLRSLKVEAPSDLRDLVWLPAELTLANGGATVAL-L-PARYAETVEHGDDAARLGRKTEWLDSG-----LPVGQRLFVTDA-GETALFDLRELDFEPTDA--
2 PsiBlast_PDB 95.55100%-114 - C6 -4UQY ? A:[5-261] ---------------------IAEELLRAGRLDDALKALQEQVRSQPS-N---------ATLRIFLF-QLLAVMGQWARAQNQL-KVVGELDASALPMVQTY----STAI--------DCEALRREVFAGRLTPVIL-GQPAEWIAPL----LQALSLD-AEGHGEAA---QALR-EQAFDAAPAVPGRI-GEAPFAWLADADTRLGPVLEVI-VN-GRYAWLPMSNLRSLKVEAPSDLRDLVWLPAELTLANGGATVAL-L-PARYAETVEHGDDAARLGRKTEWLDSG-----LPVGQRLFVTDA-GETALFDLRELDFEP-----
1 PsiBlast_PDB 94.39100%-111 - C6 -4UQZ ? A:[2-259] ---------------------IAEELLRAGRLDDALKALQEQVRSQPS-N---------ATLRIFLF-QLLAVMGQWARAQNQL-KVVGELDASALPMVQTY----STAI--------DCEALRREVFAGRLTPVIL-GQPAEWIAPL----LQALSLD-AEGHGEAA---QALR-EQAFDAAPAVPGRI-GEAPFAWLADADTRLGPVLEVI-VN-GRYAWLPMSNLRSLKVEAPSDLRDLVWLPAELTLANGGATVAL-L-PARYAETVEHGDDAARLGRKTEWLDSG-----LPVGQRLFVTDA-GETALFDLRELDFEPT----
28 HHSearch 48.6624%-100 - C6 -2KC7 - ? A:[6-69] ---------------------TIKELINQGDIENALQALEEFLQTEPVGK---------DEAYYLMG-NAYRKLGDWQKALNNY-QSAIELNPDSPALQARK----MVMD--------ILNFYNKDMYNQLEHHHHH-H---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29 Fugue 48.5524% -34 - C6 -1ZBP - ? A:[2-267] -------TQ-------------WKNALSEGQLQQALELLIEAIKASPK-D---------ASLRSSFI-ELLCIDGDFERADEQLMQ-SIKLFPEYLPGASQL----RHLV--------KAAQARKDFAQGAATAKVL-GENEELTKSL----VSFNL-SMVSQDYEQV---SELA-LQIEELRQEKGFLA-NDTSFSDVRDIDDRLGGYIELFSTA-GNYFLVPIASINTLEIKSATSLLESVWRPVEFDIDGLGEGEGHMPMTYVDSE-----SDAQKLGRETDWKQIADKEVYLGLGLKCWLVGEMALP-ISDLQNLQVIKELALE
4 PsiBlast_PDB 48.4525% -91 - C6 -2KC7 - ? A:[8-80] -----------------------KELINQGDIENALQALEEFLQTEPV-G---------KDEAYYLMGNAYRKLGDWQKALNNY-QSAIELNPDS-PALQAR----KMVM--------DILNFYNKDMYNQLEHHHH-HH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20 HHSearch 46.7113% -75 - C6 -3AS5 ? A:[16-142] -----------------------ISHAKAGRYSQAVMLLEQVYDADAF-D---------VDVALHLG-IAYVKTGAVDRGTELL-ERSLADAPDNVKVATVLGLTYVQVQ--------KYDLAVPLL-I-----KVAEANPINFNVRF----RLGVALD-NLGRFDEA---IDSF-KIALGLRPNEGKVH-RAIAFSYEQMGRHEEALPHFKK-AN-ELDEGASVELALVPR------------------------------------------------------------------------------------------------
6 HHSearch 46.7025% -41 - C6 -1ZBP - ? A:[2-263] --------------------TQWKNALSEGQLQQALELLIEAIKASPK-D---------ASLRSSFI-ELLCIDGDFERADEQL-MQSIKLFPEYLPGASQL----RHLV--------KAAQARKDFAQGAATAKVL-GENEELTKSL----VSFNLSM-VSQDYEQV---SELA-LQIEELRQE-KGFLANDTSFSDVRDIDDRLGGYIELFSTA-GNYFLVPIASINTLEIKSATSLLESVWRPVEFDIDGLGEGEGH-M-PMTYVDSE---SDAQKLGRETDWKQIADKEVYLGLGLKCWLVGE-MALPISDLQNLQVIKELA--
18 HHSearch 46.5817% -74 - C6 -2VQ2 ? A:[16-145] -----------------------MEYMRGQDYRQATASIEDALKSDPK-N---------ELAWLVRA-EIYQYLKVNDKAQESF-RQALSIKPDSAEINNNY----GWFLCGRLNRPAESMAYFDKALA---DP----TYPTPYIANL----NKGICSA-KQGQFGLA---EAYL-KRSLAAQPQFPPAF-KELARTKMLAGQLGDADYYFKK-YQ-SRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQANFPYSEE-L-QTVLT------------------------------------------------------------
21 HHSearch 45.4423% -71 - C6 -1ELW STIP1_HUMAN A:[11-71] ----------------------GNKALSVGNIDDALQCYSEAIKLDPH-N---------HVLYSNRS-AAYAKKGDYQKAYEDG-CKTVDLKPDWGKGYSRK----AAAL--------EFLNRFEEAKRTYEEGLKH-EANNPQLKEG----LQNMEAR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22 HHSearch 44.9820% -75 - C6 -2XCB ? A:[26-85] -----------------------FNQYQAGKWDDAQKIFQALCMLDHY-D---------ARYFLGLG-ACRQSLGLYEQALQSY-SYGALMDINEPRFPFHA----AECH--------LQLGDLDGAESGFYSARAL-AAAQPAHEAL----AARAGAM-LEAVTARK---D------------------------------------------------------------------------------------------------------------------------------------------------------------
24 HHSearch 44.6314% -68 - C6 -2VYI - SGTA_HUMAN A:[95-158] -------------------KTEGNEQMKVENFEAAVHFYGKAIELNPA-N---------AVYFCNRA-AAYSKLGNYAGAVQDC-ERAICIDPAY-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14 HHSearch 44.6118%-104 - C6 -3AS5 - ? A:[52-108] -------------------------YVKTGAVDRGTELLERSLADAPD-N---------VKVATVLG-LTYVQVQKYDLAVPLL-IKVAEANPINFNVRFRL----GVAL--------DNLGRFDEAIDSFKIALGL-RPNEGKVHRA----IAFSYEQ-MGRHEEAL---PHFK-KANELDEGASVELA-LVPR-------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 44.5228% -42 - C6 -1ZBP - ? A:[8-226] --------------------------LSEGQLQQALELLIEAIKASPK-D---------ASLRSSFI-ELLCIDGDFERADEQL-MQSIKLFPEYLPGASQL----RHLV--------KAAQARKDFAQGAATAKVL-GENEELTKSLVSFNLSMVSQD-YEQVSELALQIEELRQEKGFLA---------NDTSFSDVRDIDDRLGGYIELF-STAGNYFLVPIASINTLEIKSATSLLESVWRPVEFDIDGLGEGEGH-M-PMTY---VDSESDAQKLGRETDWKQIA-----DKEVYLGLGLKC-WLVGEMALPISDLQNLQV--
17 HHSearch 44.4115%-112 - C6 -3MKR - COPE_BOVIN A:[22-88] ----------------------VKNAFYIGSYQQCINEAQRVKPSSPERD---------VERDVFLY-RAYLAQRKYGVVLD-------EIKPSSAPELQAV----RMFA--------EYLASHSRRDAIVAELDRE-MSRSVDVTNT----TFLLMAA-SIYFYDQN---PDAA-LRTLHQGDSLECMA-MTVQILLKLDRLDLARKELKKM-QD-QDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLL-L-LNGQAACHMAQGRWEAAEGVLQEALDK-----DSGHPETLINLV-VLSQHLGKPPEVTNRYLS--
11 HHSearch 44.1120% -79 - C6 -2FO7 ? A:[10-69] ------------------------AYYKQGDYDEAIEYYQKALELDPR-S---------AEAWYNLG-NAYYKQGDYDEAIEYY-QKALELDPRSAEAWYNL----GNAY--------YKQGDYDEAIEYYQKALEL-DPRSAEAWYN----LGNAYYK-QGDYDEAI---EYYQ-KALELDPRS-----------------------------------------------------------------------------------------------------------------------------------------------
12 HHSearch 43.3422%-109 - C6 -2Y4T - DNJC3_HUMAN A:[80-139] ------------------------VFLAMGKSKAALPDLTKVIQLKMD-F---------TAARLQRG-HLLLKQGKLDEAEDDF-KKVLKSNPSENEEKEAQ----SQLI--------KSDEMQRLRSQALNAFGSG-DYTAAIAFLD----KILEVCV-WDAELREL---RAEC-FIKEGEPRKAISDL-KAASKLKNDNTEAFYKISTLYY-QL-GDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEEL-I-RDGRYTDATSKYESVMKTEPSIAEYTV-----RSKERICHCFSK-DEKPVEAIRVCSEVLQME--
27 HHSearch 43.1827% -95 - C6 -3IEG - DNJC3_MOUSE A:[44-105] ----------------------GKKLLAAGQLADALSQFHAAVDGDPD-N---------YIAYYRRA-TVFLAMGKSKAALPDL-TKVIALKMDFTAARLQR----GHLL--------LKQGKLDEAEDDFKKVLKS-NPSEQEEKEA----ESQLVKA-DEMQRLRS---QALD-AFDGADYTAAITFL-DKILEVCVWDAELRELRAECFI-KE-GEPRKAISDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSE-V-RECLKLDQDHKRCFAHYKQVKKLNKLI-----ESAEELIRDGRY-TDATSKYESVMKTEPSVA--
10 HHSearch 42.509% -70 - C6 -3FFL - APC7_HUMAN A:[23-149] ------------------VIDHVRDMAAAGLHSNVRLLSSLLLTLSNN-NPELFSPPQKYQLLVYHA-DSLFHDKEYRNAVSKY-TMALQQKKAL-------------------------------------------CLPSEIEVKY----KLAECYT-VLKQDKDA---IAIL-DGIPSRQRTPKINM-LLANLYK----------------------------------------------------------------------------------------------------------------------------------
25 HHSearch 42.3715% -80 * C6 *2VSY - ? A:[32-90] ------------------------AELGMGDTTAGEMAVQRGLALHPG-H---------PEAVARLG-RVRWTQQRHAEAAVLL-QQASDAAPEHPGIALWL----GHAL--------EDAGQAEAAAAAYTRAHQL-LPEEPYITAQ----LLNWRRR-LCDWRALD---VLSA-QVRAAVAQGVGAVE-PFAFLSEDASAAEQLACARTRA-QA-IAASVRPLAPTRVRSKGPLRVGFVSNGFGAHPTGLLTVALFEA-L-QRRQPDLQMHLFATSGDDGSTLRTRLA-----QASTLHDVTALG-HLATAKHIRHHGIDLLFD--
13 HHSearch 41.1316% -84 - C6 -2LNI - A:[22-83] ---------------------KGNECFQKGDYPQAMKHYTEAIKRNPK-D---------AKLYSNRA-ACYTKLLEFQLALKDC-EECIQLEPTFIKGYTRK----AAAL--------EAMKDYTKAMDVYQKALDL-DSSCKEAADG----YQRCMMA-QYN---------------------------------------------------------------------------------------------------------------------------------------------------------------------