@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA4037: (2016-02-23 )
MIDIDRLSKRFSGRTVVNDLSFRIDRGEIVGLLGPNGAGKSTTLKMLSGFLAPSAGSVRIFGFDMQDKARQAQKLIGYLPENAPSYGEMTVEGFLAFVASIRDYSGREKRRRIDSAMDCMELRDERRSIIETLSKGFKRRVALAQAILHDPELLLLDEPTDGLDPNQKHQVRQLVKNLSESKIVVISTHILEEVSFMCSRALVINGGRLLADNTPGELRTRSRYHHAVSLSIEAPVDPLAIAMLPGVAGIEGRPDRAGTLTILARPGAQILPALNRLIHGSGWRVSGVRTEHGQLEEVFRQLTREPPA

Atome Classification :

(23 SA) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10.-.--......20........30........40........50........60.-----.....-..---70...--.....80....-..--..90........100-.....--..110-------........120...--..--..130--------.......140.......150.......160.......170.-.....-.180.--.--.----....-..190.......200.......210.......220.......230---.........240.......250.......260.......270---------.......280.......290.......300......------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIDIDRLSKRFS-G--RTVVNDLSFRIDRGEIVGLLGPNGAGKSTTLKMLSGFLAPSAGSVRIFG-----FDMQD-KA---RQAQK--LIGYLPENAPS-YG--EMTVEGFLAFVASIR-DYSGR--EKRR--------RIDSAMDCMELRDE--RR--SIIET--------LSKGFKRRVALAQAILHDPELLLLDEPTDGLDPNQKHQVRQ-LVKNL-SE--S--K--I----VVIS-THILEEVSFMCSRALVINGGRLLADNTPGELRTRSRYHHAVSL-----SIEAPVDPLAIAMLPGVAGIEGRPDRAGTLTILARPGAQILP---------ALNRLIHGSGWRVSGVRTEHGQLEEVFRQLTREPPA------------------
54 Fugue 89.3925% -86 - C1 -1Z47 ? A:[11-355] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSMTIEFVGVEKIYP-GG-ARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGG------KRVT-DL---PPQKR--NVGLVFQNYAL-FQ--HMTVYDNVSFGLREK-RVPKD--EMDA--------RVRELLRFMRLESY--AN--RFPHE--------LSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRT-FVRQV-HD--EMGV--T----SVFV-THDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGESNVWTRAVQNGRIEVAGAALPVDPAVSEGSEVAVVVRPKDVELQPASEREAHAQVVRSAFKGSYSACWIRTKDGEVWEVHVPSADRHRWSPGAWVHMNVTRWFIFPR
50 HHSearch 85.5836%-108 - C1 -1VPL ? A:[16-235] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VVVKDLRKRIG-K--KEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFG-----KNVVE-EP---HEVRK--LISYLPEEAGA-YR--NMQGIEYLRFVAGFY-ASSSS--EIEE--------MVERATEIAGLGEK--IK--DRVST--------YSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRK-ILKQA-SQE-G--L--T----ILVS-SHNMLEVEFLCDRIALIHNGTIVETGTVEELKE------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 84.0935%-104 - C1 -1VPL ? A:[18-241] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKDLRKRIG-K--KEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFG-----KNVVE-EP---HEVRK--LISYLPEEAGA-YR--NMQGIEYLRFVAGFY-ASSSS--EIEE--------MVERATEIAGLGEK--IK--DRVST--------YSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRK-ILKQA-SQ--E--G--LT---ILVS-SHNMLEVEFLCDRIALIHNGTIVETGTVEELKERYKAQN------------------------------------------------------------------------------------------------------------------
21 PsiBlast_CBE 81.2236%-101 - C1 -4P32 LPTB_ECOLI B:[8-223] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAKAYK-G--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHA-RA---RRG-----IGYLPQEASI-FR--RLSVYDNLMAVLQIRDDLSAE--QRED--------RANELMEEFHIEHL--RD--SMGQS--------LSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKR-IIEHL-RD--S--G--LG---VLIT-DHNVRETLAVCERAYIVSQGHLIAHGTPTEI--------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 79.0336%-102 - C1 -4P33 LPTB_ECOLI A:[8-223] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAKAYK-G--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHA-RA---RRG-----IGYLPQEASI-FR--RLSVYDNLMAVLQIRDDLSAE--QRED--------RANELMEEFHIEHL--RD--SMGQS--------LSGGERRRVEIARALAANPKFILLDQPFAGVDPISVIDIKR-IIEHL-RD--S--G--LG---VLIT-DHNVRETLAVCERAYIVSQGHLIAHGTPTEI--------------------------------------------------------------------------------------------------------------------------
32 HHSearch 78.5331% -95 - C1 -1Z47 ? A:[15-236] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IEFVGVEKIYPGG--ARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGG-----KRVTD-LP----PQKR--NVGLVFQNYAL-FQ--HMTVYDNVSFGLREK-RVPKD--EMDA--------RVRELLRFMRLESY--AN--RFPHE--------LSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRT-FVRQV-HDEMG--V--T----SVFV-THDQEEALEVADRVLVLHEGNVEQFGTPEEVYEK-----------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 78.3636% -98 - C1 -4P32 LPTB_ECOLI A:[8-223] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAKAYK-G--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHA-RA---RRG-----IGYLPQEASI-FR--RLSVYDNLMAVLQIRDDLSAE--QRED--------RANELMEEFHIEHL--RD--SMGQS--------LSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKR-IIEHL-RD--S--G--LG---VLIT-DHNVRETLAVCERAYIVSQGHLIAHGTPTEI--------------------------------------------------------------------------------------------------------------------------
23 PsiBlast_CBE 78.2436%-100 - C1 -4P33 LPTB_ECOLI B:[8-223] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAKAYK-G--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHA-RA---RRG-----IGYLPQEASI-FR--RLSVYDNLMAVLQIRDDLSAE--QRED--------RANELMEEFHIEHL--RD--SMGQS--------LSGGERRRVEIARALAANPKFILLDQPFAGVDPISVIDIKR-IIEHL-RD--S--G--LG---VLIT-DHNVRETLAVCERAYIVSQGHLIAHGTPTEI--------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 78.1836% -96 - C1 -4QC2 ? A:[9-224] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAKAYK-G--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHA-RA---RRG-----IGYLPQEASI-FR--RLSVYDNLMAVLQIRDDLSAE--QRED--------RANELMEEFHIEHL--RD--SMGQS--------LSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKR-IIEHL-RD--S--G--LG---VLIT-DHNVRETLAVCERAYIVSQGHLIAHGTPTEI--------------------------------------------------------------------------------------------------------------------------
24 PsiBlast_CBE 76.8132%-104 - C1 -4WBS ? B:[42-265] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VRNLKKRYG-S--RTVVKDVSLDVKSGEVVGLLGPNGAGKTTSFYMIVGLVPLDAGEIDLDGKS---ISLLP-IH---KRASL--GLSYLPQEASV-FR--KLSVEENIRAVLELQ---VG----GKRLSKDAIASRTEALLDELQISHL--RE--NPALS--------LSGGERRRVEIARALATNPSFILLDEPFAGVDPIAVLEIQK-IVKFL-KQ--R--N--IG---VLIT-DHNVRETLGICDHAYIISDGSVLAAGAPGDI--------------------------------------------------------------------------------------------------------------------------
22 PsiBlast_CBE 76.1436% -94 - C1 -4QC2 ? B:[9-224] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAKAYK-G--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHA-RA---RRG-----IGYLPQEASI-FR--RLSVYDNLMAVLQIRDDLSAE--QRED--------RANELMEEFHIEHL--RD--SMGQS--------LSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKR-IIEHL-RD--S--G--LG---VLIT-DHNVRETLAVCERAYIVSQGHLIAHGTPTEI--------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 76.0334%-100 - C1 -4RVC - ? A:[3-222] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLEVKDLSGGYT-A--QNVLEDVTFVVDRGEMVALIGLNGAGKSTTIKHIIGLMEPRRGAISING-----YRLAD-GP---ETYRR--QFAYIPETPVL-YE--ELTLEEHLRLAAMAY-GLSEA--EYER--------RLPPLLR--EFRLE--RRLSSFPAH--------FSKGMKQKVMIVCAFLLEPPLYIIDEPFLGLDPLAIH---A-LLERM-NE--Q--K--AKGAGILLS-THILATAERYCDSFVILHNGRVKAKGTLDDIR-------------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 75.0732%-107 - C1 -4WBS ? A:[42-265] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VRNLKKRYG-S--RTVVKDVSLDVKSGEVVGLLGPNGAGKTTSFYMIVGLVPLDAGEIDLDGKS---ISLLP-IH---KRASL--GLSYLPQEASV-FR--KLSVEENIRAVLELQ---VGD--DGKRLSKDAIASRTEALLDELQISHL--RE--NPALS--------LSGGERRRVEIARALATNPSFILLDEPFAGVDPIAVLEIQK-IVKFL-KQ--R--N--IG---VLIT-DHNVRETLGICDHAYIISDGSVLAAGAPGDI--------------------------------------------------------------------------------------------------------------------------
26 PsiBlast_CBE 72.1331% -87 - C1 -2IT1 ? B:[4-227] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IKLENIVKKFG-N--FTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIY--------FDEKD-VT---ELPPKDRNVGLVFQNWAL-YP--HMTVYKNIAFPLELR-KAPRE--EIDK--------KVREVAKMLHIDKL--LN--RYPWQ--------LSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRA-ELKRL-QK--E--LGIT----TVYV-THDQAEALAMADRIAVIREGEILQVGTPDEVYYKPKY--------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 71.6833% -97 - C1 -4MKI ECFA2_CALS4 B:[27-249] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKDINFSIDDEEFVGIIGHTGSGKSTLIQQLNGLLKPSKGKIYING-----IDITD-KKVSLKDIRK--QVG-LVFQYPE-YQLFEETVFKDIAFGPSNL-GLSEE--EVKE--------RVYEAMEIVGISKELADK--SPFE---------LSGGQKRRVAIAGILAMRPKILILDEPTAGLDPKGKQEILN-KIKEI-HD--K--YKMI----TILV-SHNMEDIARIADKIIVMNRGKIELIGTPREVFREAERLEKIGL-----SV-------------------------------------------------------------------------------------------------------
39 HHSearch 71.6433% -86 - C1 -2YYZ ? A:[3-223] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SIRVVNLKKYFG-K--VKAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEIYFDD-----VLVND-IP----PKYR--EVGMVFQNYAL-YP--HMTVFENIAFPLRAR-RISKD--EVEK--------RVVEIARKLLIDNL--LD--RKPTQ--------LSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRA-EIKHL-QQELG--I--T----SVYV-THDQAEAMTMASRIAVFNQGKLVQYGTPDEVYD------------------------------------------------------------------------------------------------------------------------
25 PsiBlast_CBE 71.6333% -96 - C1 -4MKI ECFA2_CALS4 A:[27-249] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKDINFSIDDEEFVGIIGHTGSGKSTLIQQLNGLLKPSKGKIYING-----IDITD-KKVSLKDIRK--QVG-LVFQYPE-YQLFEETVFKDIAFGPSNL-GLSEE--EVKE--------RVYEAMEIVGISKELADK--SPFE---------LSGGQKRRVAIAGILAMRPKILILDEPTAGLDPKGKQEILN-KIKEI-HD--K--YKMI----TILV-SHNMEDIARIADKIIVMNRGKIELIGTPREVFREAERLEKIGL-----SV-------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 71.3131% -83 - C1 -2IT1 - ? A:[4-227] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IKLENIVKKFG-N--FTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIY--------FDEKD-VT---ELPPKDRNVGLVFQNWAL-YP--HMTVYKNIAFPLELR-KAPRE--EIDK--------KVREVAKMLHIDKL--LN--RYPWQ--------LSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRA-ELKRL-QK--E--LGIT----TVYV-THDQAEALAMADRIAVIREGEILQVGTPDEVYYKPKY--------------------------------------------------------------------------------------------------------------------
28 PsiBlast_CBE 70.6732% -99 - C1 -3FVQ FBPC_NEIG1 B:[5-226] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LHIGHLSKSFQ-N--TPVLNDISLSLDPGEILFIIGASGCGKTTLLRCLAGFEQPDSGEISLSGKTI--FSKNT-NL---PVRER--RLGYLVQEGVL-FP--HLTVYRNIAY--GLG-NGKGRTAQERQ--------RIEAMLELTGISEL--AG--RYPHE--------LSGGQQQRAALARALAPDPELILLDEPFSALDEQLRRQIREDMIAALRAN--G--K--S----AVFV-SHDREEALQYADRIAVMKQGRILQTASPHEL--------------------------------------------------------------------------------------------------------------------------
59 Fugue 70.3821% -80 - C1 -3B60 MSBA_SALTY A:[10-581] WQTFRRLWPTIAPFKAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKTDRSVLLWMPLVVIGLMILRGITSYISSYCISWVSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDEGKRVIDRATGDLEFRNVTFTYP-GREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDG-----HDLREYTL---ASLRN--QVALVSQNVHL-FN--D-TVANNIAY--ART-EEYSR--EQIE--------EAARMAYAMDFINK--MD--NGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQA-ALDEL-QK--N--R--T----SLVI-AHRLSTIEQ-ADEIVVVEDGIIVERGTHSELLAQHGV----------------------------------------------------------------------------------------YAQLHKMQFG------------------
13 PsiBlast_PDB 64.6832% -94 - C1 -1VCI ? A:[13-239] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKLENLTKRFG-N--FTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIY-FG-----DRDVT-YL---PPKDR--NISMVFQ---------HMTVYENIAFPL--K-KFPKD--EIDK--------RVRWAAELLQIEEL--LN--RYPAQ--------LSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRA-EIKKL-QQ--KL-K--V----TTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLR-----------------------------------------------------------------------------------------------------------------------
31 PsiBlast_CBE 57.5932% -92 - C1 -4HLU ECFA1_THEMA C:[12-206] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IELNSVSFRYN-G--DYVLKDVNAEFETGKIYVVVGKNGSGKTTLLKILAGLLA-AAGEIFLDG-------SPA-DP---FLLRK--NVGYVFQNPSSQII--GATVEEDVAFSLEIM-GLDES--EMRK--------RIKKVLELVGLSGL--AA--ADPLN--------LSGGQKQRLAIASMLARDTRFLALDEPVSMLDPPSQREIFQ-VLESLKNE--G--K--G----IILV-THELEYLDDM-----------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 53.8635% -19 - C1 -4P31 LPTB_ECOLI A:[8-223] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAKAYK-G--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHA-RA---RRG-----IGYLPQEASI-FR--RLSVYDNLMAVLQIRDDLSAE--QRED--------RANELMEEFHIEHL--RD--SMGQS--------LSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKR-IIEHL-RD--S--G--LG---VLIT-DHNVRETLAVCERAYIVSQGHLIAHGTPTEI--------------------------------------------------------------------------------------------------------------------------