@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA4864: (2016-03-02 )
MTAALPDLSFHPAWHAQLELAYARAGDATRPVTRRHAGPLRVQKHLYAEGPEVCQHILVHPPGGIAGGDSLAFDVRLGERAWAQLTSPGAAKWYRAACPARQTLEIHLEPGATLEWLPQESIVFAGAQAELETRIQLRGDARLFYWDMVALGRPASGERFASGHFVAALDIRRDDRLLWHERQRIDGGDRLLDSPIGLAGHPVLATLVASGEIDTDLLQRCRALPCAGRGNLSQLPGGLLVARCLADEALHARAWLIELWRLLRPALLGREAVPPRIWST

Atome Classification :

(20 SA) ------------.........10.......-------.20....-..--------..30---....-....40.-------...----.---------....50.----.......60..-------...-...70...--------------------..--...80..------------.-..-.--..-90...---.....-100.---------.-----------.-.....110...-----------------...-.-120--......-..130..--------....------.-140..-.--...----..150......---------.160....-...170.....------------------..180.......--------190------...---------------....200---.-.....-.210-----.-----------------....---------...220--...-..---------...-----.230...-------.--...240.--------.----------.....250.-----....--------.-----.260-......-.--270..-.-....280-----------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ------------MTAALPDLSFHPAWHAQL-------ELAYARA-GD--------ATRP---VTRR-HAGPL-R-------VQK----H---------LYAEGPE----VCQHILVHPPG-------GIA-GGDSLAFD--------------------VR--LGERAWA------------Q-LT-S--PG-AAKWY---RAACP-AR-Q---------T-----------L-EIHLEPGATLE-----------------WLP-Q-ES---IVFAGA-QAELETR--------IQLR------G-D-ARL-F--YWD----MVALGRPASGE---------RFASGHFV-AALDIRRDDRL------------------LWHERQRIDGGD--------RLL------DSP---------------IGLAGHP---V-LATLV-ASG------E-----------------IDTD---------LLQR----CRA-LP---------CAG-----RGNLSQL-------P--GGLLVAR--------C----------LADEALHAR-----AWLI--------E-----LWRL-LRPALL-G--REAVP-P-RIWST-------------------------------------
30 Fugue 89.9818% -90 - C6 -3SF5 UREH_HELPY B:[5-265] ------------------------AQESKL-------RLKTKIGADG--------RCVI---EDNF-FTPPF-K-------LMA----P---------FYPKDD-----LAEIMLLAVSP-------GMM-RGDAQDVQ--------------------LN--IGPNCKL------------R-IT-S--QS-FEKIH---NTEDGFAS-R---------D-----------M-HIVVGENAFLD-----------------FAP-F-PL---IPFENA-HFKGNTT--------ISLR------S-S-SQL-L--YSE----IIVAGRVARNE---------LFKFNRLH-TKISILQDEKP------------------IYYDNTILDPKT--------TDL------NNM---------------CMFDGYT---H-YLNLV-LVNC-----P-----------------IELS---------GVRE----CIE-ES---------EGV-----DGAVSET-------A--SSHLCVK--------A----------LAKGSEPLL-----HLRE--------K-----IARL-VTQTTT-Q--KV------------------------------------------------
31 Fugue 83.6118% -44 - C7 -4CZX PAN2_NEUCR A:[1-324] PHMMDSRDWTQLGCVAYPS-PIHPDYHAGPAS-----TIAFDNQ-DE--------LLWI---GTQKGFAGSF-IGRELKRFTAF----R---------IHPETDG----PLRQFLFVDKG-------VIFLGSRSVYMA--------------------AR--SGVPIWSIRHESMQDLRAMS-FT-S--KG-TSEIL---VAGWQ--N-K---------M-----------L-VIDVNKGEVVK-----------------ELP-T-QD---QYSFLK-MSRYICA--------ATNK------G-T-VNI-L--D--------PITFTIKKQ---------WQAHGAFI-NDLDTSNDFIV------------------TCGGSHRQTHNTPAILDPYVKVF------DLK---------------NMSAMNP---VPFAPLA-AHV------R-----------------MHPR---------MLTT----AIV-VN---------QAG-----QIHVTDL-------L--NPSNSQV--------C----------YTQ--PQGV-----VLHF--------D-----VSRT-GEGKAL-A--DNKHN-T-YVWGSPNKIQFTE-----------------------------
38 Fugue 75.3520% -52 * C7 *3NO2 ? A:[3-276] ---------------------------SPQ-------HLLVGGS-GW--------NKIA---IINK-DTKEI-V-------WEY----P---------L-EKGWE-----CNSVAATKAG--------------EILFS--------------------YS--KG----A------------KMIT-R--DG-RELWN---IAAPAGCEMQ---------T-----------A-RILPDGNALVA-----------------WCG-H-PS---TILEVNMKGEVLSK--------TEFE------T-G-IER-P--HAQ----FRQINKNKKGN---------YLVPLFATSEVREIAPNGQL------------------LNSVK----------------LS------GTP---------------FSSAFLD---N-GDCLV-ACGDAHCFVQ-----------------LNLESNR------IVRR----VNA-ND---------IEGVQLFFVAQLFPL-------QN-GGLYICNWQGHD---R----------EAGKGKHPQ-----LVEI--------DSEGKVVWQL-NDKVKF-GM-ISTIC-PIRE----------------------------------------
36 Fugue 74.8619% -53 - C7 -3BWS ? A:[27-433] -------------GTEIVKFSIHPYKGTVI-------RLGEEIL-PF--------KVLE---MDKN-IALVEMA-------IPV----YKDEKEIELKLSSPGFQ----NSSYRIRKPEELNE----KLI-ALDKEGIT--------------------HR--FISRFKT------------G-F--Q--PK-SVRFIDNTRLAIP-LL-E---------DEGMDVLDINSGQ-TVRLSPPEKYKKKLGFVETISIPEHNELWVS-QMQANAVHVFDLK-TLAYKAT--------VDLT------G-KWSKI-L--LYDPIRDLVYCSNWIS-E---------DISVIDRK-TKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGG--------RLGIYSMDKEKL---------------IDTIGPP---G-NKRHI-VSG------NTENKIYVSDMCCSKIEVYDLK---------EKKV----QKS-IP---------VFD-----KPNTIAL-------SPDGKYLYVS--------CRGPNHPTEGYLKKGLVLGK-----VYVIDTTTDTVKE-----FWEAGNQPTGL-D--VSPDN-R-YLVISDFLDHQIRVYRRDGF----------------------
37 Fugue 70.3318% -61 - C7 -3ACP - RPN14_YEAST A:[1-417] ------------MTKTITVAHIQYDFKAVLEENDENDDEFYINV-DK--------NLNE---IKEH-KIVVL-G-------NSR----G---------VDAGKGN----TFEKVGSHLYK-------ARL-DGHDFLFNTIIRDGSKMLKRADYTAVDTAK--LQMRRFI------------L-GT-T--EG-DIKVL---DSNFN-LQ-R---------E-----------IDQAHVSEITKLK-----------------FFP-SGEA---LISSSQ-DMQLKIWSVKDGSNPRTLI------GHR-ATV-T--DIA----IIDRGRNVLSASLDGTIRLWECGTGTTI-HTFNRKENPHD------------------GVNSIALFVGTD--------RQL------HEISTSKKNNLEFGTYGKYVIAGHVSGVI-TVHNV-FSK------E-----------------QTIQ---------LPSKFTCSCNS-LTVDGNNANYIYAGYE---NGMLAQWDLRSPECP--VGEFLINEGTPINNVY----------FAAGALFVSSGFDTSIKL--------D-----IISD-PESERP-A--IEFET-P-TFLVSNDDEVSQFCYVSDDESNGEVLEVGKNNFCALYNLSNP
35 Fugue 69.0616% -58 - C2 -2BBV CAPSD_BBV A:[56-363] ------------------LTRLSQPGLAFL-------KCAFAPP-DF--------NTDPGKGIPDR-FEGKV-V-------TRK----D---------VLNQSINFTANRDTFILIAPTP-------GVA-YWVADVPA--------------------GTFPISTTTFN------------A-VN-F--PG-FNSMF---GNAAA-SR-SDQVSSFRYAS-----------M-NVGIYPTSNLM-----------------QFA-G-SI---TVWKCP-VKLSNVQ--------FPVATTPATSA-L-VHT-LVGLDG----VLAVGPDNFSE---------SFIKGVFS-QSVCNEPD----------------------FEFSDILEGIQ--------TLP------PAN---------------VTVATSG---Q-PFNLA-AGA------E-----------------AVSGIVGWGNMDTIVIR----VSA-PT-----------G-----AVNSAIL-------K--TWACLEY--------RPNPNAMLYQ-FGHDSPPCD-----EVAL--------Q-----EYRT-VARSLP-VAVIAAQN---------------------------------------------
34 Fugue 62.2522% 7 - C3 -4OVY ? A:[1-305] -------------EEPLPSWNDSAARRAIL-------EYVKSVT-TEGSPRFVPVSERI---VTFD-NDGTL-W-------CEQPMYVQ---------LAFALDR----VRLLADKHPEWRTEEPFRAVI-EKDLPALA---------------------K--LGAKGLT------------E-LTMATHAGMTDDEF---ENIVT-EW-I---------R-----------K-ARHPKFHRPYTECV--------------YQPML-EL---LAFLRQ-H-EFKTF--------IVSG------A-G-IEFMR--PWA----KEVYGIPPEQ------------VIGSSV-KLKYELRDGKP------------------VLVRLAELNFID--------DQA------GKP---------------VGIRQV----I-GRRPVMAVG------N-----------------SDGD---------Y---------EMLE---------YVT-----SGPANGL-----------GLIVHH--------TD---------AVREFAYDR-----QSPF--------GR----LDRA-LTDATSKG--WIVIDMQ-RDWKVIFPES--------------------------------
27 HHSearch 40.7020% -32 * C8 *3K8R ? A:[24-84] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------E--PR-AAKAR---YD--R-SS-A---------R-----------V-IVDLENGCTFA-----------------FPP-R-LA---QGLEGA-SDDQLCA--------VEIL------G-Q-GYG-L--HWE----TL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29 HHSearch 39.5716% -58 - C8 -2X8N - ? A:[34-82] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------E-G---------V-----------I-VFILANDRELK-----------------FRP-D-DL---QATYGA-TPEQLRE--------IEIS------P-S-GLG-V--YFE----TL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20 HHSearch 38.9615% -36 * C6 *1VH4 - SUFD_ECOLI A:[170-254] --------------------------------------------------------------------------------------------------------------------------------------HYRHH--------------------LD--LAEGAEA------------T-VI-E--HF-VSL-N---DARHF-TG-A---------R-----------F-TINVAANAHLQ-----------------HIK-L-AF---E-NPLS-HHFAHND--------LLLA------E-D-ATA-F--SHS----FLLGGAVLR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 35.1737% 23 - C5 -4RM1 ? B:[142-192] -------------------------------------------------------------------------------------------------------------------------------------------------------------------LGEQAGG------------V-LT-S--GG-SLANL---QALAV-AR-N---------V-----------A-FDSVEPGIT-------------------GLA-Q-RP---VIFASE-AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 32.9337% 20 - C5 -4RJ0 - ? B:[142-192] -------------------------------------------------------------------------------------------------------------------------------------------------------------------LGEQAGG------------V-LT-S--GG-SLANL---QALAV-AR-N---------V-----------A-FDSVEPGIT-------------------GLA-Q-RP---VIFASE-AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 32.2934% 66 - C5 -4WR2 ? A:[116-164] ----------------LPDPSFDPLTQNAI-------ELMAEKV-RQ--------SAVP---VTLV-PSGPL-T-------NIA----L---------FIANYPE----L-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 32.2437% 26 - C5 -4RIZ ? A:[142-192] -------------------------------------------------------------------------------------------------------------------------------------------------------------------LGEQAGG------------V-LT-S--GG-SLANL---QALAV-AR-N---------V-----------A-FDSVEPGIT-------------------GLA-Q-RP---VIFASE-AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 28.9831% 54 - C5 -4N44 ? A:[305-362] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WT----VDELDLIESNE---------AFAAQSLA-VAKDLKFD-----------------------MNKVNVNGGA--------IAL------GHP---------------IGASGAR---I-LVTLV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19 PsiBlast_CBE 28.8431% 55 * C5 *4N44 ? B:[305-362] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WT----VDELDLIESNE---------AFAAQSLA-VAKDLKFD-----------------------MNKVNVNGGA--------IAL------GHP---------------IGASGAR---I-LVTLV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 28.7031% 51 - C5 -4N45 - ? A:[305-362] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WT----VDELDLIESNE---------AFAAQSLA-VAKDLKFD-----------------------MNKVNVNGGA--------IAL------GHP---------------IGASGAR---I-LVTLV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 21.9645% 104 - C9 -3R18 - SUOX_CHICK A:[394-424] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VAR--------L----------MGDKAPPGR-----AWAW--------A-----LWEL-TVPVEA-G--TE------------------------------------------------
17 PsiBlast_PDB 21.5645% 110 - C9 -2A9C - SUOX_CHICK A:[300-330] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VAR--------L----------MGDKAPPGR-----AWAW--------A-----LWEL-TVPVEA-G--TE------------------------------------------------
18 PsiBlast_PDB 21.4745% 116 - C9 -2A9D - SUOX_CHICK A:[300-330] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VAR--------L----------MGDKAPPGR-----AWAW--------A-----LWEL-TVPVEA-G--TE------------------------------------------------