@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0147: (2015-11-28 )
MEKETILSVNNLHVDFHTYAGEVKAIRDVNFELKKGETLAIVGESGSGKSVTTRTLIGLNAKNSEISGNVQFKGRNLVELSEEEWTKVRGNEISMIFQDPMTSLDPTMKIGMQIAEPMMIHQKISKKDALKLALELMKDVGIPNAEEHINDYPHQWSGGMRQRAVIAIALAADPEILIADEPTTALDVTIQAQILNLMKKIQAERDSSIVFITHDLGVVAGMADRVAVMYAGKIVEFGTVDEVFYNPQHPYTWGLLNSMPTTDTESGSLESIPGTPPDLLNPPKGDAFAARNEFALDIDHEEEPPYFKVSETHFAATWLLDERSPKVLPPLPIQKRWEKWNEIEGRKA

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_3(4FWI)
?
[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ATP_C_11(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ADP_B_2(2FFA)

[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_D_12(1XEF)

[Raw transfer]




ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]




1 PsiBlast_PDB 93.7338% -99 - C1 -4FWI 6.0 ?
76 HHSearch 77.2733%-109 - C1 -3TUI - METN_ECOLI -
68 Fugue 77.2027% -83 - C1 -3TUZ - METN_ECOLI -
33 PsiBlast_CBE 75.7132%-102 - C1 -3C4J - ? -
5 PsiBlast_PDB 75.2733%-103 - C1 -3TUZ - METN_ECOLI -
13 PsiBlast_PDB 74.7633% -99 - C1 -4YMV - ? -
42 PsiBlast_CBE 74.4632% -98 - C1 -3C41 - ? -
25 PsiBlast_CBE 74.4433%-101 - C1 -3TUI - METN_ECOLI -
29 PsiBlast_CBE 74.4033%-102 - C1 -4U02 - ? -
40 PsiBlast_CBE 74.3232% -98 - C1 -2OLK - ? -
14 PsiBlast_PDB 74.2933%-100 - C1 -4YMW - ? -
32 PsiBlast_CBE 74.2033% -95 - C1 -4YMU 5.6 ?
39 PsiBlast_CBE 74.0632% -99 - C1 -2OLK - ? -
38 PsiBlast_CBE 73.9132% -99 - C1 -2OLK - ? -
12 PsiBlast_PDB 73.7933% -97 - C1 -4YMU - ? -
31 PsiBlast_CBE 73.7133% -95 - C1 -4YMV 4.6 ?
4 PsiBlast_PDB 73.6833%-100 - C1 -3TUI - METN_ECOLI -
10 PsiBlast_PDB 73.6533% -97 - C1 -4YMS - ? -
30 PsiBlast_CBE 73.5433% -94 - C1 -4U02 - ? -
16 PsiBlast_PDB 73.1432% -98 - C1 -2OLK - ? -
48 PsiBlast_CBE 55.0431% -92 - C1 -2PMK 4.9
49 PsiBlast_CBE 54.3731% -89 - C1 -2FF7 4.7
61 PsiBlast_CBE 53.9331% -90 - C1 -2FFA 4.9
63 PsiBlast_CBE 53.3231% -90 - C1 -1XEF 5.0 HLYBP_ECOLX
60 PsiBlast_CBE 52.1731% -84 - C1 -2FGJ 5.2 HLYBP_ECOLX
59 PsiBlast_CBE 52.1431% -90 - C1 -2FGJ 5.7 HLYBP_ECOLX
55 PsiBlast_CBE 51.8531% -87 - C1 -2FGK 5.5 HLYBP_ECOLX
53 PsiBlast_CBE 51.7731% -88 - C1 -2FGK 5.0 HLYBP_ECOLX
62 PsiBlast_CBE 51.5631% -85 - C1 -1XEF 5.5
65 PsiBlast_CBE 51.2731% -83 - C1 -1XEF 4.6 HLYBP_ECOLX
54 PsiBlast_CBE 50.5631% -84 - C1 -2FGK 5.6 HLYBP_ECOLX
64 PsiBlast_CBE 50.5331% -86 - C1 -1XEF 5.8 HLYBP_ECOLX
52 PsiBlast_CBE 50.3531% -85 - C1 -2FGK 5.7
57 PsiBlast_CBE 49.6431% -81 - C1 -2FGJ 5.2