@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00082_PRTK_E: (2014-08-21 )
MRLSVLLSLLPLALGAPAVEQRSEAAPLIEARGEMVANKYIVKFKEGSALSALDAAMEKISGKPDHVYKNVFSGFAATLDENMVRVLRAHPDVEYIEQDAVVTINAAQTNAPWGLARISSTSPGTSTYYYDESAGQGSCVYVIDTGIEASHPEFEGRAQMVKTYYYSSRDGNGHGTHCAGTVGSRTYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGGYSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDRYDRRSSFSNYGSVLDIFGPGTSILSTWIGGSTRSISGTSMATPHVAGLAAYLMTLGKTTAASACRYIADTANKGDLSNIPFGTVNLLAYNNYQA

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TE6_A_3(3L1K)
PRTK_ENGAL
[Raw transfer]



B2A_A_13(2PWA)
PRTK_ENGAL
[Raw transfer]



B2A_A_13(2PWA)
PRTK_ENGAL
[Raw transfer]



2DB_A_7(2ID8)
PRTK_ENGAL
[Raw transfer]



3ID_A_4(1OYO)
PRTK_ENGAL
[Raw transfer]



COU_A_5(2PWB)
PRTK_ENGAL
[Raw transfer]



CHAIN_P_2(2DUJ)
PRTK_ENGAL
[Raw transfer]
-
ACY_A_5(1EGQ)
PRTK_ENGAL
[Raw transfer]



O_A_4(4FON)
PRTK_ENGAL
[Raw transfer]



PMS_A_9(1SH7)
?
[Raw transfer]



I3C_A_3(3GT4)
PRTK_ENGAL
[Raw transfer]



CHAIN_B_2(2PQ2)
PRTK_ENGAL
[Raw transfer]
-
PMS_A_2(4DZT)
AQL1_THEAQ
[Raw transfer]



BRV_A_4(3GT3)
PRTK_ENGAL
[Raw transfer]



CHAIN_I_2(1PJ8)
PRTK_ENGAL
[Raw transfer]
-
CHAIN_I_2(1BJR)
PRTK_ENGAL
[Raw transfer]
-
CHAIN_P_2(2DQK)
PRTK_ENGAL
[Raw transfer]
-
DIO_A_6(1WMD)
?
[Raw transfer]



PMS_A_13(1Y9Z)
?
[Raw transfer]



AU4_A_5(2PYZ)
PRTK_ENGAL
[Raw transfer]



ACY_A_4(2HD4)
PRTK_ENGAL
[Raw transfer]



CHAIN_I_2(3PRK)
PRTK_ENGAL
[Raw transfer]
-
TE_A_3(4FON)
PRTK_ENGAL
[Raw transfer]



CHAIN_B_2(1PFG)
PRTK_ENGAL
[Raw transfer]
-
CHAIN_I_2(2DP4)
PRTK_ENGAL
[Raw transfer]
-
CCN_A_4(1CNM)
PRTK_ENGAL
[Raw transfer]



CCN_A_6(1CNM)
PRTK_ENGAL
[Raw transfer]



CHAIN_B_2(2HD4)
PRTK_ENGAL
[Raw transfer]
-
CHAIN_C_2(1PEK)
PRTK_ENGAL
[Raw transfer]
-
NH2_B_4(1PFG)
PRTK_ENGAL
[Raw transfer]



CHAIN_B_2(3OSZ)
PRTK_ENGAL
[Raw transfer]
-
CHAIN_B_2(3PTL)
PRTK_ENGAL
[Raw transfer]
-
CHAIN_B_2(2HPZ)
PRTK_ENGAL
[Raw transfer]
-
DIO_A_7(1WMD)
?
[Raw transfer]



CHAIN_B_2(2B6N)
?
[Raw transfer]
-
40 PsiBlast_CBE 94.8699% -84 - C2 -3OSZ 1.7 PRTK_ENGAL
4 PsiBlast_PDB 94.79100% -82 - C2 -1EGQ 4.0 PRTK_ENGAL
55 PsiBlast_CBE 94.6899% -83 - C2 -2DUJ 3.6 PRTK_ENGAL
3 PsiBlast_PDB 94.10100% -83 - C2 -1CNM 3.4 PRTK_ENGAL
52 PsiBlast_CBE 94.0699% -82 - C2 -2HPZ 4.5 PRTK_ENGAL
48 PsiBlast_CBE 93.8199% -82 - C2 -2PWB 2.0 PRTK_ENGAL
51 PsiBlast_CBE 93.7699% -83 - C2 -2ID8 3.6 PRTK_ENGAL
35 PsiBlast_CBE 93.6499% -81 - C2 -4FON 2.8 PRTK_ENGAL
50 PsiBlast_CBE 93.5499% -83 - C2 -2PQ2 2.9 PRTK_ENGAL
21 PsiBlast_CBE 93.53100% -82 - C2 -3PTL 5.6 PRTK_ENGAL
56 PsiBlast_CBE 93.5299% -82 - C2 -2DQK 4.2 PRTK_ENGAL
53 PsiBlast_CBE 93.4699% -82 - C2 -2HD4 3.3 PRTK_ENGAL
68 HHSearch 93.44100% -82 - C2 -2PWA 4.1 PRTK_ENGAL
47 PsiBlast_CBE 93.3799% -82 - C2 -2PYZ 2.5 PRTK_ENGAL
5 PsiBlast_PDB 93.29100% -81 - C2 -1OYO 3.5 PRTK_ENGAL
7 PsiBlast_PDB 93.20100% -80 - C2 -2DP4 3.0 PRTK_ENGAL
6 PsiBlast_PDB 93.13100% -81 - C2 -1PJ8 Error PRTK_ENGAL
1 PsiBlast_PDB 92.94100% -80 - C2 -3PRK 3.0 PRTK_ENGAL
41 PsiBlast_CBE 92.9399% -81 - C2 -3L1K 2.8 PRTK_ENGAL
42 PsiBlast_CBE 92.7199% -81 - C2 -3GT4 4.1 PRTK_ENGAL
43 PsiBlast_CBE 92.4599% -80 - C2 -3GT3 4.0 PRTK_ENGAL
2 PsiBlast_PDB 91.71100% -80 - C2 -1BJR 1.2 PRTK_ENGAL
33 PsiBlast_CBE 91.3899% -79 - C2 -1PEK 3.6 PRTK_ENGAL
32 PsiBlast_CBE 91.1399% -79 - C2 -1PFG 3.3 PRTK_ENGAL
74 HHSearch 67.0449% -72 - C2 -4DZT 2.7 AQL1_THEAQ
76 HHSearch 66.0046% -69 - C2 -1SH7 3.0 ?
75 HHSearch 63.5242% -70 - C2 -2B6N 3.2 ?
89 HHSearch 26.6131% -48 - C2 -1Y9Z 2.7 ?