@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00089_UROK_H: (2014-08-24 )
MRALLARLLLCVLVVSDSKGSNELHQVPSNCDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYEGNGHFYRGKASTDTMGRPCLPWNSATVLQQTYHAHRSDALQLGLGKHNYCRNPDNRRRPWCYVQVGLKPLVQECMVHDCADGKKPSSPPEELKFQCGQKTLRPRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSHTKEENGLAL

Atome Classification :

(48 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ZBR_B_3(3QN7)
UROK_HUMAN
[Raw transfer]




SI1_U_4(1W0Z)
?
[Raw transfer]




7IN_D_4(1VJA)
?
[Raw transfer]




SM1_U_4(1W13)
?
[Raw transfer]




SJ1_U_4(1W10)
?
[Raw transfer]




5IN_D_4(1VJ9)
?
[Raw transfer]




2IN_D_4(1SC8)
?
[Raw transfer]




SK1_U_4(1W11)
?
[Raw transfer]




SH1_U_4(1W14)
?
[Raw transfer]




SL1_U_2(1W12)
?
[Raw transfer]




4PG_U_3(2R2W)
?
[Raw transfer]




1NK_H_3(4JZE)
?
[Raw transfer]




PL0_A_4(2O8W)
UROK_HUMAN
[Raw transfer]




BEN_A_3(2O8U)
?
[Raw transfer]




AGB_C_3(1EJN)
UROK_HUMAN
[Raw transfer]




696_B_3(1O5A)
?
[Raw transfer]




AMR_A_4(1F5L)
UROK_HUMAN
[Raw transfer]




135_B_5(1GJA)
?
[Raw transfer]




BAM_B_6(1C5Z)
?
[Raw transfer]




130_B_5(1GJB)
?
[Raw transfer]




655_B_5(1O3P)
?
[Raw transfer]




130_B_5(1GJC)
?
[Raw transfer]




BAM_D_4(1F5K)
?
[Raw transfer]




438_B_5(3IG6)
?
[Raw transfer]




ESP_B_6(1C5Y)
?
[Raw transfer]




132_B_5(1GJ7)
?
[Raw transfer]




438_D_6(3IG6)
?
[Raw transfer]




ABV_U_3(3MHW)
?
[Raw transfer]




ESI_B_3(1O5B)
?
[Raw transfer]




134_B_5(1GJ9)
?
[Raw transfer]




ESI_B_6(1C5X)
?
[Raw transfer]




ABV_U_3(3MHW)
?
[Raw transfer]




136_B_5(1GJD)
?
[Raw transfer]




ESI_B_6(1C5W)
?
[Raw transfer]




133_B_5(1GJ8)
?
[Raw transfer]




4AZ_A_2(3KGP)
?
[Raw transfer]




INH_A_2(3BG8)

[Raw transfer]




BEN_B_2(2OQ5)
TM11E_HUMAN
[Raw transfer]




CR9_B_3(1O5C)
?
[Raw transfer]




B25_U_2(3MWI)
?
[Raw transfer]




UKP_D_4(1F92)
?
[Raw transfer]




2BS_U_2(3KID)
?
[Raw transfer]




4AL_A_2(3KHV)
UROK_HUMAN
[Raw transfer]




CHAIN_P_2(3OY6)
UROK_HUMAN
[Raw transfer]

-

CHAIN_P_2(3M61)
?
[Raw transfer]

-

CHAIN_B_2(2NWN)
UROK_HUMAN
[Raw transfer]

-

1NB_B_2(1BRU)
CEL2A_PIG
[Raw transfer]




438_B_5(3IG6)
?
[Raw transfer]




CHAIN_B_2(3QN7)
UROK_HUMAN
[Raw transfer]

-

56 PsiBlast_CBE 94.4399%-121 - C2 -1W12 6.4 ?
2 PsiBlast_PDB 94.2599%-119 - C2 -1SC8 6.2 ?
59 PsiBlast_CBE 94.2299%-121 - C2 -1W0Z 5.9 ?
76 HHSearch 94.15100%-122 - C2 -3MHW 2.6 ?
11 PsiBlast_PDB 93.9299%-118 - C2 -2R2W 5.5 ?
40 PsiBlast_CBE 93.9199%-119 - C2 -3QN7 7.1 UROK_HUMAN
55 PsiBlast_CBE 93.9099%-119 - C2 -1W13 6.8 ?
7 PsiBlast_PDB 93.9099%-119 - C2 -1EJN 6.3 UROK_HUMAN
3 PsiBlast_PDB 93.8799%-122 - C2 -1VJ9 7.4 ?
20 PsiBlast_PDB 93.8299%-123 - C2 -1GJA 5.3 ?
54 PsiBlast_CBE 93.7499%-119 - C2 -1W14 4.8 ?
4 PsiBlast_PDB 93.7399%-119 - C2 -1VJA 6.3 ?
58 PsiBlast_CBE 93.7199%-120 - C2 -1W10 4.4 ?
9 PsiBlast_PDB 93.6999%-121 - C2 -1F5L 3.4 UROK_HUMAN
57 PsiBlast_CBE 93.6899%-120 - C2 -1W11 6.1 ?
41 PsiBlast_CBE 93.6399%-119 - C2 -3OY6 8.5 UROK_HUMAN
33 PsiBlast_CBE 93.6399%-126 - C2 -1C5Z 3.2 ?
10 PsiBlast_PDB 93.3799%-119 - C2 -1F92 6.0 ?
44 PsiBlast_CBE 93.3699%-117 - C2 -3M61 7.5 ?
52 PsiBlast_CBE 93.3298%-120 - C2 -2O8U 3.0 ?
26 PsiBlast_CBE 93.28100%-121 - C2 -3IG6 7.0 ?
8 PsiBlast_PDB 93.2299%-120 - C2 -1F5K 2.9 ?
5 PsiBlast_PDB 93.17100%-121 - C2 -3IG6 7.8 ?
47 PsiBlast_CBE 93.1599%-120 - C2 -3KGP 2.7 ?
37 PsiBlast_CBE 92.8698%-122 - C2 -1O5C 6.0 ?
31 PsiBlast_CBE 92.8599%-121 - C2 -1GJB 5.8 ?
34 PsiBlast_CBE 92.7399%-122 - C2 -1C5Y 3.4 ?
51 PsiBlast_CBE 92.6698%-119 - C2 -2O8W 2.8 UROK_HUMAN
32 PsiBlast_CBE 92.5399%-123 - C2 -1GJ9 6.2 ?
61 PsiBlast_CBE 92.3899%-120 - C2 -3MWI 3.0 ?
36 PsiBlast_CBE 92.3199%-121 - C2 -1C5W 3.9 ?
29 PsiBlast_CBE 92.3199%-121 - C2 -1GJD 5.7 ?
35 PsiBlast_CBE 92.1899%-122 - C2 -1C5X 4.0 ?
45 PsiBlast_CBE 92.1499%-122 - C2 -3KID 3.0 ?
19 PsiBlast_PDB 92.1399%-120 - C2 -1GJ8 5.4 ?
49 PsiBlast_CBE 92.0699%-119 - C2 -2NWN 6.6 UROK_HUMAN
38 PsiBlast_CBE 92.0698%-122 - C2 -1O5B 3.7 ?
39 PsiBlast_CBE 91.9098%-120 - C2 -1O5A 5.6 ?
46 PsiBlast_CBE 91.8199%-118 - C2 -3KHV 2.7 UROK_HUMAN
18 PsiBlast_PDB 91.8199%-122 - C2 -1GJ7 6.2 ?
27 PsiBlast_CBE 91.6499%-118 - C2 -1LMW - ?
30 PsiBlast_CBE 91.2399%-120 - C2 -1GJC 5.8 ?
28 PsiBlast_CBE 90.8699%-120 - C2 -1O3P 5.5 ?
6 PsiBlast_PDB 90.5099%-114 - C2 -1LMW - ?
89 HHSearch 71.7137%-109 * C2 *2OQ5 3.2 TM11E_HUMAN
87 HHSearch 67.3933%-101 - C2 -3BG8 4.0
99 HHSearch 67.1735%-106 - C2 -1BRU 3.6 CEL2A_PIG
97 HHSearch 66.1931% -93 - C2 -4JZE 7.1 ?