@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF01327_DEF_PS: (2014-09-22 )
MAILNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPGIGLAATQVNVHKRIVVMDLSEDKSEPRVFINPEFEPLTEDMDQYQEGCLSVPGFYENVDRPQKVRIKALDRDGNPFEEVAEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIRKKLEKQHRQQA

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BB2_A_5(1IX1)
DEF_PSEAE
[Raw transfer]




BB2_A_3(1LRY)
DEF_PSEAE
[Raw transfer]




BB2_B_7(1IX1)
DEF_PSEAE
[Raw transfer]




2BB_A_5(3K6L)
DEF_ECOLI
[Raw transfer]




GNR_B_6(1S17)
DEF_PSEAE
[Raw transfer]




BB1_A_7(1G27)
DEF_ECOLI
[Raw transfer]




BB2_A_9(1LRU)
DEF_ECOLI
[Raw transfer]




GOL_A_7(1N5N)
DEF_PSEAE
[Raw transfer]




BB2_A_5(3U04)
?
[Raw transfer]




GNR_A_5(1S17)
DEF_PSEAE
[Raw transfer]




BB2_A_7(1G2A)
DEF_ECOLI
[Raw transfer]




GOL_A_5(1N5N)
DEF_PSEAE
[Raw transfer]




GOL_B_6(1N5N)
DEF_PSEAE
[Raw transfer]




MLN_A_4(1BSJ)
DEF_ECOLI
[Raw transfer]




MLN_A_4(1BSK)
DEF_ECOLI
[Raw transfer]




BB2_A_5(3UWB)
?
[Raw transfer]




FMT_A_3(1XEO)
DEF_ECOLI
[Raw transfer]




NVC_A_3(3E3U)
DEF_MYCTU
[Raw transfer]




FMT_A_3(2W3U)
DEF_ECOLI
[Raw transfer]




FMT_A_13(1Y6H)
DEF_LEPIN
[Raw transfer]




2PE_A_9(1BSZ)
DEF_ECOLI
[Raw transfer]




BRR_A_5(1RL4)
?
[Raw transfer]




QAP_A_3(4E9A)
?
[Raw transfer]




2PE_A_9(1BS4)
DEF_ECOLI
[Raw transfer]




2PE_A_9(1ICJ)
DEF_ECOLI
[Raw transfer]




FMT_A_7(4DR8)
?
[Raw transfer]




EOH_A_4(2W3T)
DEF_ECOLI
[Raw transfer]




EOH_A_4(2W3T)
DEF_ECOLI
[Raw transfer]




CHAIN_D_4(1BS8)
DEF_ECOLI
[Raw transfer]

-

H2S_A_5(4AL2)
DEF_ECOLI
[Raw transfer]




CHAIN_D_4(1BS6)
DEF_ECOLI
[Raw transfer]

-

EDO_B_10(4DR8)
?
[Raw transfer]




21 PsiBlast_CBE 96.87100% -93 - C2 -1IX1 7.0 DEF_PSEAE
4 PsiBlast_PDB 96.81100%-100 - C2 -1LRY 7.1 DEF_PSEAE
3 PsiBlast_PDB 96.6099% -95 - C2 -1S17 4.5 DEF_PSEAE
22 PsiBlast_CBE 96.4899%-100 - C2 -1S17 4.7 DEF_PSEAE
23 PsiBlast_CBE 96.1399% -96 - C2 -1N5N 2.1 DEF_PSEAE
1 PsiBlast_PDB 95.91100% -94 - C2 -1IX1 7.0 DEF_PSEAE
2 PsiBlast_PDB 95.8399% -95 - C2 -1N5N 2.6 DEF_PSEAE
35 HHSearch 82.0056% -91 - C2 -2W3T 2.4 DEF_ECOLI
5 PsiBlast_PDB 81.8856% -96 - C2 -3K6L 5.8 DEF_ECOLI
12 PsiBlast_PDB 81.8756% -95 - C2 -1BS6 3.9 DEF_ECOLI
6 PsiBlast_PDB 81.5856% -99 - C2 -4AL2 2.8 DEF_ECOLI
14 PsiBlast_PDB 80.8656% -90 - C2 -1BS8 4.0 DEF_ECOLI
31 HHSearch 80.7256% -90 - C2 -1XEO 3.5 DEF_ECOLI
19 PsiBlast_PDB 80.7056% -90 - C2 -1G2A 6.2 DEF_ECOLI
15 PsiBlast_PDB 80.6256% -88 - C2 -1BSZ 5.5 DEF_ECOLI
17 PsiBlast_PDB 80.5856% -90 - C2 -1BSK 6.8 DEF_ECOLI
9 PsiBlast_PDB 80.4456% -88 - C2 -1ICJ 5.7 DEF_ECOLI
8 PsiBlast_PDB 80.1356% -86 - C2 -2W3U 3.4 DEF_ECOLI
10 PsiBlast_PDB 80.1256% -88 - C2 -1BS4 5.6 DEF_ECOLI
16 PsiBlast_PDB 79.9156% -88 - C2 -1BSJ 6.7 DEF_ECOLI
18 PsiBlast_PDB 79.7356% -92 - C2 -1G27 5.9 DEF_ECOLI
20 PsiBlast_PDB 78.2256% -89 - C2 -1LRU 6.3 DEF_ECOLI
34 HHSearch 77.1548% -93 - C2 -3U04 7.0 ?
36 HHSearch 71.5447% -87 - C2 -4E9A 6.9 ?
42 HHSearch 68.1447% -86 - C2 -4DR8 3.3 ?
40 HHSearch 67.1739% -74 - C2 -3E3U 6.1 DEF_MYCTU
38 HHSearch 66.2142% -97 - C2 -1Y6H 3.4 DEF_LEPIN
37 HHSearch 65.8337% -91 - C2 -1RL4 4.2 ?
46 HHSearch 60.5836% -86 - C2 -3UWB 5.6 ?