@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : FPR3_HUMAN: (2016-01-09 )
METNFSIPLNETEEVLPEPAGHTVLWIFSLLVHGVTFVFGVLGNGLVIWVAGFRMTRTVNTICYLNLALADFSFSAILPFRMVSVAMREKWPFGSFLCKLVHVMIDINLFVSVYLITIIALDRCICVLHPAWAQNHRTMSLAKRVMTGLWIFTIVLTLPNFIFWTTISTTNGDTYCIFNFAFWGDTAVERLNVFITMAKVFLILHFIIGFSVPMSIITVCYGIIAAKIHRNHMIKSSRPLRVFAAVVASFFICWFPYELIGILMAVWLKEMLLNGKYKIILVLINPTSSLAFFNSCLNPILYVFMGRNFQERLIRSLPTSLERALTEVPDSAQTSNTDTTSASPPEETELQAM

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLC_A_11(4XT1)
US28_HCMVA
[Raw transfer]
27 HHSearch 90.4932%-165 - C2 -3ODU - CXCR4_HUMAN (first) -
2 PsiBlast_PDB 89.2031%-173 - C2 -5C1M - ? -
5 PsiBlast_PDB 85.4330%-174 - C2 -4RWA - C562_ECOLX (first) -
6 PsiBlast_PDB 84.7330%-173 - C2 -4RWD - C562_ECOLX (first) -
44 Fugue 84.2818%-139 - C2 -1F88 - OPSD_BOVIN -
25 HHSearch 83.6324%-164 - C2 -3UON - ACM2_HUMAN (first) -
7 PsiBlast_PDB 82.6030%-174 - C2 -4N6H - OPRD_HUMAN -
36 HHSearch 82.0522%-163 - C2 -2Z73 - OPSD_TODPA -
11 PsiBlast_PDB 81.8129%-180 - C2 -4EA3 - C562_ECOLX (first) -
29 HHSearch 81.3522%-156 - C2 -3RZE - ENLYS_BPT4 (first) -
35 HHSearch 80.7921%-169 * C2 *3PBL - DRD3_HUMAN (first) -
20 PsiBlast_PDB 80.2324%-149 - C2 -2KS9 - NK1R_HUMAN -
17 PsiBlast_PDB 79.8221%-172 - C2 -4MBS - CCR5_HUMAN (first) -
28 HHSearch 79.8131%-146 - C2 -2LNL - CXCR1_HUMAN -
13 PsiBlast_PDB 79.1529%-159 - C2 -4XT3 - US28_HCMVA -
47 Fugue 78.5625%-130 - C2 -3ODU - CXCR4_HUMAN (first) -
1 PsiBlast_PDB 78.4631%-156 - C2 -2LNL - CXCR1_HUMAN -
12 PsiBlast_PDB 77.8429%-167 - C2 -4XT1 3.2 US28_HCMVA
45 Fugue 77.7021%-164 - C2 -4XNV - P2RY1_HUMAN (first) -
43 Fugue 76.3019%-112 - C2 -1U19 - OPSD_BOVIN -