@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : IRAK1_HUMAN: (2015-10-09 )
MAGGPGPGEPAAPGAQHFLYEVPPWVMCRFYKVMDALEPADWCQFAALIVRDQTELRLCERSGQRTASVLWPWINRNARVADLVHILTHLQLLRARDIITAWHPPAPLPSPGTTAPRPSSIPAPAEAEAWSPRKLPSSASTFLSPAFPGSQTHSGPELGLVPSPASLWPPPPSPAPSSTKPGPESSVSLLQGARPFPFCWPLCEISRGTHNFSEELKIGEGGFGCVYRAVMRNTVYAVKRLKENADLEWTAVKQSFLTEVEQLSRFRHPNIVDFAGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQRLDILLGTARAIQFLHQDSPSLIHGDIKSSNVLLDERLTPKLGDFGLARFSRFAGSSPSQSSMVARTQTVRGTLAYLPEEYIKTGRLAVDTDTFSFGVVVLETLAGQRAVKTHGARTKYLKDLVEEEAEEAGVALRSTQSTLQAGLAADAWAAPIAMQIYKKHLDPRPGPCPPELGLGLGQLACCCLHRRAKRRPPMTQVYERLEKLQAVVAGVPGHSEAASCIPPSPQENSYVSSTGRAHSGAAPWQPLAAPSGASAQAAEQLQRGPNQPVESDESLGGLSAALRSWHLTPSCPLDPAPLREAGCPQGDTAGESSWGSGPGSRPTAVEGLALGSSASSSSEPPQIIINPARQKMVQKLALYEDGALDSLQLLSSSSLPGLGLEQDRQGPEESDEFQS

Atome Classification :

(18 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_2(4OA9)

[Raw transfer]



ANP_A_5(4Q5J)
BRI1_ARATH
[Raw transfer]



ANP_A_5(4OH4)
BRI1_ARATH
[Raw transfer]



ADP_A_2(4OAC)

[Raw transfer]



ATP_A_2(4OAB)

[Raw transfer]



ADP_A_2(4OA2)

[Raw transfer]



STU_B_4(4U97)
IRAK4_HUMAN
[Raw transfer]



STU_E_5(2OIC)
IRAK4_HUMAN
[Raw transfer]



T12_C_9(2NRU)
IRAK4_HUMAN
[Raw transfer]



STU_B_4(4U9A)
IRAK4_HUMAN
[Raw transfer]



T12_A_7(2NRU)
IRAK4_HUMAN
[Raw transfer]



STU_A_3(4U9A)
IRAK4_HUMAN
[Raw transfer]



4S2_A_5(4ZTM)
?
[Raw transfer]



T12_B_8(2NRU)
IRAK4_HUMAN
[Raw transfer]



STU_A_3(4U97)
IRAK4_HUMAN
[Raw transfer]



T12_D_10(2NRU)
IRAK4_HUMAN
[Raw transfer]



STU_A_8(2NRY)
IRAK4_HUMAN
[Raw transfer]



4GD_A_5(4YO6)
IRAK4_HUMAN
[Raw transfer]
5 PsiBlast_PDB 90.9534% -93 - C3 -2OIC 8.6 IRAK4_HUMAN
1 PsiBlast_PDB 89.1834% -92 - C3 -2NRY 9.1 IRAK4_HUMAN
2 PsiBlast_PDB 89.0134% -90 - C3 -2NRU 6.0 IRAK4_HUMAN
11 PsiBlast_PDB 88.8333% -82 - C3 -4OH4 5.5 BRI1_ARATH
24 PsiBlast_CBE 86.2833% -86 - C3 -2NRU 5.1 IRAK4_HUMAN
15 PsiBlast_PDB 86.2632% -81 - C3 -4Q5J 5.6 BRI1_ARATH
22 PsiBlast_CBE 86.2134% -96 - C3 -4U97 7.5 IRAK4_HUMAN
3 PsiBlast_PDB 86.1234% -95 - C3 -4U97 7.7 IRAK4_HUMAN
21 PsiBlast_CBE 85.3334% -98 - C3 -4U9A 7.2 IRAK4_HUMAN
25 PsiBlast_CBE 85.2533% -85 - C3 -2NRU 6.0 IRAK4_HUMAN
13 PsiBlast_PDB 85.0133% -78 - C3 -4OAB 5.0
23 PsiBlast_CBE 84.8133% -84 - C3 -2NRU 5.9 IRAK4_HUMAN
10 PsiBlast_PDB 84.5033% -76 - C3 -4OAC 4.5
9 PsiBlast_PDB 84.4833% -77 - C3 -4OA9 5.5
4 PsiBlast_PDB 83.9034% -94 - C3 -4U9A 7.8 IRAK4_HUMAN
8 PsiBlast_PDB 81.8033% -70 - C3 -4OA2 4.0
7 PsiBlast_PDB 72.7434% -62 - C3 -4ZTM 5.1 ?
6 PsiBlast_PDB 71.9534% -63 - C3 -4YO6 5.3 IRAK4_HUMAN