@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-29 )
AVSCGQVSSALSPCISYARGNGASPSAACCSGVRSLASSARSTADKQAACKCIKSAAAGLNAGKAAGIPTKCGVSVPYAISSSVDCSKIR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
30 SP3 95.9670%-112 - C5 -1FK5 6.1 NLTP_MAIZE
11 HHSearch 93.5369%-119 - C5 -1AFH - NLTP_MAIZE -
16 HHSearch 90.1848%-119 - C5 -1BWO 3.7 NLTP1_WHEAT
12 HHSearch 87.5458%-114 - C5 -1T12 - NLTP1_TOBAC -
15 HHSearch 84.6042%-128 - C5 -1SIY - NLTP1_VIGRR -
14 HHSearch 82.9549%-115 - C5 -2ALG 2.4 NLTP1_PRUPE
25 HHSearch 64.6723%-118 - C5 -1SM7 - ? -
27 HHSearch 63.3732%-101 - C5 -1PSY - 2SS_RICCO -
24 HHSearch 59.9521%-125 - C5 -1BEA - ITRF_MAIZE -
21 HHSearch 53.6320%-115 - C5 -1S6D - 2SS8_HELAN -
3 Fugue 52.7528% -88 - C5 -1L6H - NLTPX_ORYSJ -
2 Fugue 52.2725% -73 - C5 -2RKN - DIRL1_ARATH -
17 HHSearch 49.3425% -84 - C5 -2RKN - DIRL1_ARATH -
23 HHSearch 47.9316% -95 - C5 -1B1U - IAAT_ELECO -
26 HHSearch 46.6017% -84 - C5 -3OB4 - ? -
8 Fugue 45.9017% -36 - C5 -1S6D - 2SS8_HELAN -
4 Fugue 42.6814% -35 - C5 -1W2Q - CONG_ARAHY -
18 HHSearch 42.0633% -72 - C5 -1L6H - NLTPX_ORYSJ -
19 HHSearch 41.5933% -49 - C5 -1N89 - NLT2G_WHEAT -
5 Fugue 39.0322% -46 - C5 -1PSY - 2SS_RICCO -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
38 98.14100%-118 - C- -M038 - -
34 96.24100%-112 - C- -M034 - -
40 91.57100%-109 - C- -M040 - -
41 91.53100%-115 - C- -M041 - -