@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-30 )
AVTCGDVMSAIPPCMSYATGQASSPSAGCCSGVRTLNGKASTSADRQAACRCLKNLAGSFNGISMGNAANIPGKCGVSVSFPINNNVNCNNLH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
21 HHSearch 90.6358%-121 - C2 -1AFH - NLTP_MAIZE -
11 SP3 89.9658%-120 - C2 -1FK5 5.8 NLTP_MAIZE
22 HHSearch 87.6842%-129 - C2 -1T12 - NLTP1_TOBAC -
24 HHSearch 86.0445%-132 - C2 -2ALG 3.1 NLTP1_PRUPE
26 HHSearch 84.0641%-123 - C2 -1BWO 5.0 NLTP1_WHEAT
25 HHSearch 82.0137%-121 - C2 -1SIY - NLTP1_VIGRR -
34 HHSearch 58.7125%-119 - C2 -1SM7 - ? -
33 HHSearch 58.3022%-156 - C2 -1BEA - ITRF_MAIZE -
19 SP3 55.9213% -91 - C2 -1QPO - NADC_MYCTU -
16 SP3 55.5715%-139 - C2 -1HSS - IAA1_WHEAT -
36 HHSearch 55.2121% -93 - C2 -1PSY - 2SS_RICCO -
6 Fugue 51.1021%-117 - C2 -1S6D - 2SS8_HELAN -
2 Fugue 49.9224% -83 - C2 -2RKN - DIRL1_ARATH -
3 Fugue 49.5222% -50 - C2 -1PSY - 2SS_RICCO -
27 HHSearch 48.6825% -96 - C2 -2RKN - DIRL1_ARATH -
32 HHSearch 46.7514%-107 - C2 -1B1U - IAAT_ELECO -
15 SP3 46.0513% -80 - C2 -1QPO - NADC_MYCTU -
13 SP3 41.6119%-105 - C2 -1L6H - NLTPX_ORYSJ -
35 HHSearch 41.2718%-103 - C2 -3OB4 - ? -
4 Fugue 40.7525% -98 - C2 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
43 43.69100% - - C- -M043 - -
42 43.69100% - - C- -M042 - -
40 43.69100% - - C- -M040 - -