@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-03 )
LSCGQVNSALAPCITFLTKGGVPSGPCCSGVRGLLGAAKTTADRQAACNCLKAAAGSLHGLNQGNAAALPGRCGVSIPYKISTSTNCATIKF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
14 HHSearch 95.4462%-130 - C5 -1SIY - NLTP1_VIGRR -
13 HHSearch 91.4457%-131 - C5 -1T12 - NLTP1_TOBAC -
11 HHSearch 90.0762%-122 - C5 -2ALG 4.0 NLTP1_PRUPE
30 SP3 88.5563%-121 - C5 -1FK5 5.6 NLTP_MAIZE
12 HHSearch 85.3764%-110 - C5 -1AFH - NLTP_MAIZE -
15 HHSearch 83.9244%-125 - C5 -1BWO 3.1 NLTP1_WHEAT
22 HHSearch 57.3322%-146 - C5 -1BEA - ITRF_MAIZE -
27 HHSearch 54.9823%-148 * C5 *1HSS - IAA1_WHEAT -
24 HHSearch 53.8527%-120 - C5 -1SM7 - ? -
29 HHSearch 49.4418%-108 - C5 -1W2Q - CONG_ARAHY -
16 HHSearch 48.6830% -96 - C5 -2RKN - DIRL1_ARATH -
2 Fugue 48.4028% -78 - C5 -2RKN - DIRL1_ARATH -
6 Fugue 48.3825% -71 - C4 -2HW4 - PHP14_HUMAN -
34 SP3 48.1615%-130 - C5 -1QPO - NADC_MYCTU -
21 HHSearch 47.7614%-133 - C5 -1B1U - IAAT_ELECO -
28 HHSearch 46.2223%-100 - C5 -2LVF - ? -
25 HHSearch 45.8023% -85 - C5 -1PSY - 2SS_RICCO -
23 HHSearch 41.1120% -81 - C5 -3OB4 - ? -
3 Fugue 39.8729% -85 - C5 -1L6H - NLTPX_ORYSJ -
8 Fugue 39.8117% -84 - C5 -2D5R - TOB1_HUMAN -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
41 95.57100%-139 - C- -M041 - -
40 94.81100%-132 - C- -M040 - -
47 94.24100%-132 - C- -M047 - -
46 93.83100%-124 - C- -M046 - -