@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-03 )
AISCGTVASKLAPCIPYVTNRGPLGGCCGGVKSLYGLARTTPDRQSVCGCLKSLASSYNVNLGKAAGLPGQCGVNIPYKISPSTDCSKVH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
21 HHSearch 99.8770%-143 - C3 -1T12 - NLTP1_TOBAC -
22 HHSearch 86.7758%-130 - C3 -2ALG 3.9 NLTP1_PRUPE
11 SP3 86.3157%-126 - C3 -1FK5 5.5 NLTP_MAIZE
23 HHSearch 83.6457%-126 - C3 -1AFH - NLTP_MAIZE -
26 HHSearch 81.9150%-125 - C3 -1BWO 6.9 NLTP1_WHEAT
25 HHSearch 81.3447%-128 - C3 -1SIY - NLTP1_VIGRR -
35 HHSearch 59.0428%-130 - C3 -1SM7 - ? -
33 HHSearch 56.9328%-139 - C3 -1BEA - ITRF_MAIZE -
6 Fugue 53.6821%-118 - C3 -1S6D - 2SS8_HELAN -
17 SP3 52.6418%-110 - C3 -1QPO - NADC_MYCTU -
40 HHSearch 51.8717%-128 - C3 -1W2Q - CONG_ARAHY -
2 Fugue 50.3229%-106 - C3 -2RKN - DIRL1_ARATH -
3 Fugue 49.7323% -88 - C3 -1L6H - NLTPX_ORYSJ -
37 HHSearch 49.0122%-119 - C3 -1S6D - 2SS8_HELAN -
27 HHSearch 48.3830%-104 - C3 -2RKN - DIRL1_ARATH -
34 HHSearch 48.1021%-112 - C3 -3OB4 - ? -
32 HHSearch 46.1718%-126 - C3 -1B1U - IAAT_ELECO -
14 SP3 45.1717% -73 - C3 -1L6H - NLTPX_ORYSJ -
7 Fugue 44.1420% -70 - C3 -1PSY - 2SS_RICCO -
36 HHSearch 43.2124% -73 - C3 -1PSY - 2SS_RICCO -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
47 46.84100% - - C- -M047 - -
46 46.84100% - - C- -M046 - -
45 46.84100% - - C- -M045 - -
43 46.84100% - - C- -M043 - -
42 46.84100% - - C- -M042 - -