@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-04 )
LNCGQVDSKMKPCLTYVQGGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVPYTISPDIDCSRIY

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]
16 HHSearch 95.7772%-121 - C2 -1BWO 7.0 NLTP1_WHEAT
11 HHSearch 83.3144%-126 - C2 -2ALG 3.3 NLTP1_PRUPE
28 SP3 82.5153%-119 - C2 -1FK5 5.8 NLTP_MAIZE
12 HHSearch 81.2554%-117 - C2 -1AFH - NLTP_MAIZE -
14 HHSearch 80.9949%-117 - C2 -1T12 - NLTP1_TOBAC -
13 HHSearch 73.1038%-112 - C2 -1SIY - NLTP1_VIGRR -
25 HHSearch 60.5725%-122 - C2 -1SM7 - ? -
23 HHSearch 59.3724%-137 - C2 -1BEA - ITRF_MAIZE -
36 SP3 51.5213%-133 * C2 *1HSS - IAA1_WHEAT -
2 Fugue 46.3620% -85 - C2 -2RKN - DIRL1_ARATH -
22 HHSearch 45.7016% -97 - C2 -1B1U - IAAT_ELECO -
26 HHSearch 44.4825% -65 - C2 -1PSY - 2SS_RICCO -
17 HHSearch 43.7620% -76 - C2 -2RKN - DIRL1_ARATH -
24 HHSearch 42.7220% -87 - C2 -3OB4 - ? -
33 SP3 42.3515% -66 - C2 -1QPO - NADC_MYCTU -
7 Fugue 41.1623% -32 - C2 -1V74 - -
3 Fugue 40.9920% -71 - C2 -1L6H - NLTPX_ORYSJ -
34 SP3 38.4015% -67 - C2 -1QPO - NADC_MYCTU -
10 Fugue 38.1915% -50 - C2 -1EWK - GRM1_RAT -
4 Fugue 37.1314% -59 - C2 -1S6D - 2SS8_HELAN -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]
42 94.28100%-132 - C- -M042 - -
44 93.20100%-126 - C- -M044 - -
43 92.93100%-136 - C- -M043 - -