@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-05 )
AISCGAVTSDLSPCLTYLTGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTTTNCNTVKF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
13 HHSearch 95.6060%-123 - C3 -1T12 - NLTP1_TOBAC -
16 HHSearch 92.2256%-117 - C3 -1BWO 6.5 NLTP1_WHEAT
12 HHSearch 90.7960%-117 - C3 -2ALG 3.9 NLTP1_PRUPE
15 HHSearch 89.6355%-112 - C3 -1SIY - NLTP1_VIGRR -
31 SP3 85.7155%-112 - C3 -1FK5 5.6 NLTP_MAIZE
14 HHSearch 85.1757%-103 - C3 -1AFH - NLTP_MAIZE -
26 HHSearch 58.0629%-102 - C3 -1SM7 - ? -
28 HHSearch 56.9722%-129 * C3 *1HSS - IAA1_WHEAT -
30 HHSearch 55.8618% -97 - C3 -1W2Q - CONG_ARAHY -
22 HHSearch 54.8922%-125 - C3 -1BEA - ITRF_MAIZE -
5 Fugue 52.5821% -83 - C3 -1S6D - 2SS8_HELAN -
25 HHSearch 51.9130% -62 - C3 -1PSY - 2SS_RICCO -
37 SP3 51.2519%-111 - C3 -1QPO - NADC_MYCTU -
36 SP3 49.6117%-114 - C3 -1HSS - IAA1_WHEAT -
29 HHSearch 48.1120% -80 - C3 -2LVF - ? -
21 HHSearch 47.8813%-111 - C3 -1B1U - IAAT_ELECO -
17 HHSearch 46.9127% -74 - C3 -2RKN - DIRL1_ARATH -
3 Fugue 45.5526% -67 - C3 -1L6H - NLTPX_ORYSJ -
2 Fugue 45.2024% -68 - C3 -2RKN - DIRL1_ARATH -
6 Fugue 43.9325% -56 - C3 -1PSY - 2SS_RICCO -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
42 96.13100%-124 - C- -M042 - -
46 96.03100%-130 - C- -M046 - -
41 92.32100%-117 - C- -M041 - -
47 91.40100%-114 - C- -M047 - -