@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-06 )
LSCGVVAGDLAQCLTYLKKGGRVPPACCKGVVALKSAAKTTQDRQDACNCMKQTASKVGGVNAGFAAALPRLCKVNIAYKISTSTNCTSIK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
11 HHSearch 98.5254%-121 - C4 -2ALG 4.2 NLTP1_PRUPE
14 HHSearch 97.3754%-125 - C4 -1SIY - NLTP1_VIGRR -
31 SP3 91.9548%-119 - C4 -1FK5 5.2 NLTP_MAIZE
12 HHSearch 90.7150%-117 - C4 -1T12 - NLTP1_TOBAC -
13 HHSearch 87.2948%-109 - C4 -1AFH - NLTP_MAIZE -
16 HHSearch 84.1536%-122 - C4 -1BWO - NLTP1_WHEAT -
37 SP3 62.6517%-129 - C4 -1HSS - IAA1_WHEAT -
29 HHSearch 62.5820%-137 * C4 *1HSS - IAA1_WHEAT -
3 Fugue 61.4719% -70 - C4 -2OCC - COX5A_BOVIN -
27 HHSearch 61.3325%-123 - C4 -1SM7 - ? -
24 HHSearch 57.8021%-125 - C4 -1BEA - ITRF_MAIZE -
4 Fugue 55.6016% -78 - C4 -2KCK - ? -
2 Fugue 54.9124% -78 - C4 -2RKN - DIRL1_ARATH -
17 HHSearch 54.5825%-120 - C4 -2RKN - DIRL1_ARATH -
6 Fugue 54.4312% -64 - C4 -2KVC - ? -
30 HHSearch 52.7318% -83 - C4 -2LVF - ? -
39 SP3 52.5416% -99 - C4 -1QPO - NADC_MYCTU -
22 HHSearch 51.1321% -98 - C4 -1S6D - 2SS8_HELAN -
21 HHSearch 49.3024% -62 - C4 -1PSY - 2SS_RICCO -
23 HHSearch 49.0217%-124 - C4 -1B1U - IAAT_ELECO -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
41 99.00100%-128 - C- -M041 - -
47 97.26100%-130 - C- -M047 - -
45 97.01100%-128 - C- -M045 - -
46 96.16100%-123 - C- -M046 - -
42 94.31100%-127 - C- -M042 - -