@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-07 )
TITCGQVASAVGPCASYLQKGGSVPAGCCSGIKSLNSAAKTTVDRQAACKCLKTFSGSIPGINFGLASGLPGKCGVSVPYKISPSTDCSKVT

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
32 SP3 96.1259%-125 - C3 -1FK5 4.8 NLTP_MAIZE
11 HHSearch 95.8959%-133 - C3 -2ALG 3.7 NLTP1_PRUPE
13 HHSearch 90.3359%-123 - C3 -1T12 - NLTP1_TOBAC -
14 HHSearch 89.3251%-127 - C3 -1SIY - NLTP1_VIGRR -
16 HHSearch 88.7747%-132 - C3 -1BWO 4.3 NLTP1_WHEAT
12 HHSearch 88.2260%-116 - C3 -1AFH - NLTP_MAIZE -
8 Fugue 66.4224%-102 - C3 -1S6D - 2SS8_HELAN -
25 HHSearch 59.9122%-134 - C3 -1SM7 - ? -
35 SP3 59.8818%-148 - C3 -1HSS - IAA1_WHEAT -
24 HHSearch 59.1617%-156 - C3 -1BEA - ITRF_MAIZE -
30 HHSearch 58.7321%-111 - C3 -2LVF - ? -
21 HHSearch 57.0221%-132 - C3 -1S6D - 2SS8_HELAN -
31 HHSearch 56.6617%-100 - C3 -1W2Q - CONG_ARAHY -
29 HHSearch 55.1521%-154 * C3 *1HSS - IAA1_WHEAT -
23 HHSearch 53.9716%-120 - C3 -1B1U - IAAT_ELECO -
27 HHSearch 53.2823% -80 - C3 -1PSY - 2SS_RICCO -
17 HHSearch 53.1224% -93 - C3 -2RKN - DIRL1_ARATH -
7 Fugue 52.2118%-100 - C3 -1L6H - NLTPX_ORYSJ -
19 HHSearch 51.4628% -91 - C3 -1N89 - NLT2G_WHEAT -
2 Fugue 50.1422% -82 - C3 -2RKN - DIRL1_ARATH -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
48 97.60100%-141 - C- -M048 - -
46 96.29100%-138 - C- -M046 - -
49 93.94100%-150 - C- -M049 - -