@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : 598_tI_ARATH: (2014-05-11 )
ALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCNTVR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
31 SP3 92.1749%-100 - C2 -1FK5 5.7 NLTP_MAIZE
1 HHSearch 88.6348%-103 - C2 -1T12 - NLTP1_TOBAC -
2 HHSearch 87.2852% -91 - C2 -1AFH - NLTP_MAIZE -
6 HHSearch 85.9341%-101 - C2 -1BWO - NLTP1_WHEAT -
4 HHSearch 84.5145%-101 - C2 -2ALG 2.4 NLTP1_PRUPE
5 HHSearch 81.5343% -88 - C2 -1SIY - NLTP1_VIGRR -
16 HHSearch 65.1321%-103 - C2 -1BEA - ITRF_MAIZE -
12 HHSearch 62.0824% -65 - C2 -1SM7 - ? -
34 SP3 61.2616% -95 - C2 -1HSS - IAA1_WHEAT -
17 HHSearch 60.4532% -57 - C2 -1PSY - 2SS_RICCO -
20 HHSearch 55.9321% -98 - C2 -1HSS - IAA1_WHEAT -
35 SP3 54.5317% -78 - C2 -1S6D - 2SS8_HELAN -
22 Fugue 53.0526% -54 - C2 -2RKN - DIRL1_ARATH -
25 Fugue 51.1726% -35 - C2 -1PSY - 2SS_RICCO -
14 HHSearch 49.7616% -83 - C2 -1B1U - IAAT_ELECO -
32 SP3 49.2121% -59 - C2 -1L6H - NLTPX_ORYSJ -
29 Fugue 49.2116% -79 - C2 -1HSS - IAA1_WHEAT -
15 HHSearch 48.6616% -62 - C2 -1W2Q - CONG_ARAHY -
27 Fugue 47.8519% -32 * C2 *1S6D - 2SS8_HELAN -
23 Fugue 47.3530% -49 - C2 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
45 96.73100%-103 - C- -M045 - -
46 91.09100% -99 - C- -M046 - -
42 34.60100% 19 - C- -M042 - -
43 31.79100% 31 - C- -M043 - -