@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0042: (2015-11-28 )
MGQKIAVVGATGRVGHEVLSILAEFQDEGKISIDSVITFASKKSKGKKVSFGNEELTVLCLENYDFADIDIAIFCAGYHVSEKYVPIATEAGCIVIDNSSYFRMKEGVPLIIPEINKEKIMEYKNHNIISNPNCTIIQMLLVLHLLYQKAKIKRIVASTYQSTSGAGKAAMDELYNQTKKIFTNEAKKPEIFPKQIAFNCIPHIGEFMEDGSTKEEWKMQEETKKILEADIKVTATCVRVPVFIGHAIAVNVEFYQHITEEQAREMLSEVEDTGILVYDRRKDGKYITQIDVVQENAVYVSRIRKDNTVEHGLNMWIVADNLRKGAALNIVQILEILTREHLSIKCI

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3JL_A_3(4R4J)
?
[Raw transfer]




3JN_A_9(4R5H)
?
[Raw transfer]




NAP_B_11(4R4J)
?
[Raw transfer]




3JL_B_9(4R4J)
?
[Raw transfer]




NAP_A_5(4R3N)
?
[Raw transfer]




12T_B_13(3PYX)
?
[Raw transfer]




NAP_B_12(4R3N)
?
[Raw transfer]




NAP_A_10(4R5H)
?
[Raw transfer]




11C_A_3(3PWS)
?
[Raw transfer]




11C_B_6(3PWS)
?
[Raw transfer]




NAP_A_4(4R4J)
?
[Raw transfer]




NAP_A_6(4R51)
?
[Raw transfer]




NAP_A_3(3PYX)
?
[Raw transfer]




NAP_B_9(3PZB)
?
[Raw transfer]




3JM_A_7(4R54)
?
[Raw transfer]




3GQ_B_13(4R3N)
?
[Raw transfer]




NAP_B_9(3PYX)
?
[Raw transfer]




3GQ_A_4(4R3W)
?
[Raw transfer]




NAP_B_10(4R54)
?
[Raw transfer]




NAP_A_4(3PZB)
?
[Raw transfer]




NAP_A_5(4R54)
?
[Raw transfer]




4NO_B_13(4R41)
?
[Raw transfer]




4NO_A_3(4R41)
?
[Raw transfer]




MLA_A_7(1YS4)
DHAS_METJA
[Raw transfer]




NAP_B_15(4R5H)
?
[Raw transfer]




NAP_B_9(4R54)
?
[Raw transfer]




2RA_A_3(3PZB)
?
[Raw transfer]




NAP_B_15(4R51)
?
[Raw transfer]




NAP_A_3(3Q11)
?
[Raw transfer]




NAP_A_4(4R41)
?
[Raw transfer]




2RA_B_8(3PZB)
?
[Raw transfer]




NAP_B_9(3Q11)
?
[Raw transfer]




NAP_B_14(4R41)
?
[Raw transfer]




A2P_B_7(3PWS)
?
[Raw transfer]




A2P_A_8(4R3W)
?
[Raw transfer]




A2P_A_5(3PWS)
?
[Raw transfer]




CYS_A_3(3PZR)
DHAS1_VIBCH
[Raw transfer]




25A_B_10(3PWK)
?
[Raw transfer]




A2P_B_16(4R3W)
?
[Raw transfer]




CYS_A_2(3TZ6)
DHAS_MYCTU
[Raw transfer]




25A_A_3(3PWK)
?
[Raw transfer]




1 PsiBlast_PDB 95.4745%-121 - C1 -2QZ9 - DHAS2_VIBCH -
60 HHSearch 94.3847%-124 - C1 -2R00 - DHAS2_VIBCH -
25 PsiBlast_CBE 92.8339%-115 - C1 -4R51 7.0 ?
40 PsiBlast_CBE 92.4239%-112 - C1 -3PWK 6.3 ?
29 PsiBlast_CBE 92.2539%-114 - C1 -4R3W 5.6 ?
16 PsiBlast_PDB 92.1739%-116 - C1 -3Q1L - ? -
12 PsiBlast_PDB 91.9139%-114 - C1 -3PYL - ? -
37 PsiBlast_CBE 91.8439%-116 - C1 -3PYL - ? -
30 PsiBlast_CBE 91.7939%-113 - C1 -4R3N 10.0 ?
2 PsiBlast_PDB 91.7545%-121 - C1 -2R00 - DHAS2_VIBCH -
8 PsiBlast_PDB 91.7439%-115 - C1 -2GZ2 - ? -
18 PsiBlast_PDB 91.6939%-114 - C1 -4R3W 6.1 ?
27 PsiBlast_CBE 91.6839%-112 - C1 -4R4J 10.0 ?
23 PsiBlast_CBE 91.6439%-112 - C1 -4R54 10.3 ?
6 PsiBlast_PDB 91.3839%-115 - C1 -2GYY - ? -
38 PsiBlast_CBE 91.2939%-117 - C1 -3PYL - ? -
19 PsiBlast_PDB 91.2839%-115 - C1 -4R41 8.5 ?
39 PsiBlast_CBE 91.2739%-110 - C1 -3PWS 6.1 ?
17 PsiBlast_PDB 91.2439%-114 - C1 -4R3N 10.9 ?
34 PsiBlast_CBE 91.2239%-112 - C1 -3Q11 7.4 ?
20 PsiBlast_PDB 91.1039%-111 - C1 -4R4J 10.5 ?
21 PsiBlast_CBE 91.0339%-112 - C1 -4R5H 7.5 ?
11 PsiBlast_PDB 90.8739%-113 - C1 -3PWS 5.8 ?
26 PsiBlast_CBE 90.8639%-115 - C1 -4R51 10.4 ?
10 PsiBlast_PDB 90.8239%-112 - C1 -3PWK 6.1 ?
24 PsiBlast_CBE 90.7539%-112 - C1 -4R54 10.5 ?
14 PsiBlast_PDB 90.7139%-112 - C1 -3PZB 10.3 ?
13 PsiBlast_PDB 90.6739%-110 - C1 -3PYX 10.4 ?
35 PsiBlast_CBE 90.5039%-111 - C1 -3PZB 10.4 ?
22 PsiBlast_CBE 90.5039%-111 - C1 -4R5H 9.4 ?
15 PsiBlast_PDB 90.1239%-111 - C1 -3Q11 7.5 ?
28 PsiBlast_CBE 90.1039%-112 - C1 -4R41 7.8 ?
36 PsiBlast_CBE 90.0739%-109 - C1 -3PYX 10.6 ?
56 HHSearch 87.0540%-110 - C1 -3TZ6 2.7 DHAS_MYCTU
66 HHSearch 69.2030%-106 - C1 -1YS4 2.9 DHAS_METJA