@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0434: (2015-12-01 )
MNIALKYRPGSFKDLVGQDILVRILENAFTLNRIPQSILLSGASGVGKTTTARIIALCLNCSLGPTFEPCGSCKNCLTIKNSSHPDVIEIDAASHTSVDDIKVILGDICYSPISSKFKVYIIDEVHMLSSSAFNALLKTLEEPPPSVKFILATTEIKKIPITIIARCQRFDLYNIPVAKIVERLNDIAQRESYFIEKEASELIARHSGNSMRNALFLMNQAVLYNKGGVISTKSVMDILGLVDKDIIFDLMEAILGSDLQKALSLFDKAVETANPLSIFEGLLQTIQLICRFLVTKEIDSSVTECEKNRIKDLGVKKSLIFFSRLWRMLLKGVQDIKASTCSDVAAEMILISLCYLSDLPSPEQVVKKVLAQSTQQRNTRSAENIQQKSYDFDKILQLLQQNNQIYLYKQLCSNLQLVNCKPGYLKLKAVSQLDSNFCNDLKNYLSQITQQEWVITIDAGYIKKGASSLSYAPAVKGILDTFKGAKVVNIENKE

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AGS_B_8(1NJF)
DPO3X_ECOLI
[Raw transfer]



AGS_A_6(1NJF)
DPO3X_ECOLI
[Raw transfer]



AGS_D_12(1NJF)
DPO3X_ECOLI
[Raw transfer]



NACID_M_13(3GLI)
DPO3X_ECOLI
[Raw transfer]
-
NACID_K_11(3GLI)
DPO3X_ECOLI
[Raw transfer]
-
NACID_M_13(3GLF)
DPO3X_ECOLI
[Raw transfer]
-
NACID_M_13(3GLG)
DPO3X_ECOLI
[Raw transfer]
-
NACID_K_11(3GLF)
DPO3X_ECOLI
[Raw transfer]
-
NACID_K_11(3GLG)
DPO3X_ECOLI
[Raw transfer]
-
NACID_M_13(3GLI)
DPO3X_ECOLI
[Raw transfer]
-
NACID_K_11(3GLG)
DPO3X_ECOLI
[Raw transfer]
-
NACID_K_11(3GLF)
DPO3X_ECOLI
[Raw transfer]
-
NACID_M_13(3GLF)
DPO3X_ECOLI
[Raw transfer]
-
NACID_M_13(3GLG)
DPO3X_ECOLI
[Raw transfer]
-
NACID_K_11(3GLI)
DPO3X_ECOLI
[Raw transfer]
-
NACID_K_11(3GLF)
DPO3X_ECOLI
[Raw transfer]
-
NACID_M_13(3GLI)
DPO3X_ECOLI
[Raw transfer]
-
NACID_K_11(3GLG)
DPO3X_ECOLI
[Raw transfer]
-
NACID_K_11(3GLI)
DPO3X_ECOLI
[Raw transfer]
-
NACID_M_13(3GLF)
DPO3X_ECOLI
[Raw transfer]
-
NACID_M_13(3GLG)
DPO3X_ECOLI
[Raw transfer]
-
80 Fugue 94.8436%-119 - C1 -1JR3 - DPO3X_ECOLI -
90 HHSearch 93.1636%-119 - C1 -1JR3 - DPO3X_ECOLI -
21 PsiBlast_CBE 92.7338%-119 - C1 -1XXH - DPO3X_ECOLI -
38 PsiBlast_CBE 92.1538%-117 - C1 -1XXI - DPO3X_ECOLI -
1 PsiBlast_PDB 92.0838%-113 - C1 -1JR3 - DPO3X_ECOLI -
37 PsiBlast_CBE 91.9738%-111 - C1 -3GLF 4.0 DPO3X_ECOLI
34 PsiBlast_CBE 91.9138%-111 - C1 -3GLF 4.2 DPO3X_ECOLI
43 PsiBlast_CBE 91.8438%-114 - C1 -3GLG 4.0 DPO3X_ECOLI
39 PsiBlast_CBE 91.7938%-111 - C1 -1XXI - DPO3X_ECOLI -
6 PsiBlast_PDB 91.7438%-122 - C1 -1XXI - DPO3X_ECOLI -
29 PsiBlast_CBE 91.6038%-109 - C1 -3GLI 4.0 DPO3X_ECOLI
47 PsiBlast_CBE 91.5738%-106 - C1 -3GLG 4.0 DPO3X_ECOLI
22 PsiBlast_CBE 91.5238%-114 - C1 -1XXH - DPO3X_ECOLI -
44 PsiBlast_CBE 91.5038%-108 - C1 -3GLG 4.1 DPO3X_ECOLI
41 PsiBlast_CBE 91.4238%-117 - C1 -1XXI - DPO3X_ECOLI -
40 PsiBlast_CBE 91.2438%-122 - C1 -1XXI - DPO3X_ECOLI -
33 PsiBlast_CBE 91.2438%-113 - C1 -3GLF 2.4 DPO3X_ECOLI
5 PsiBlast_PDB 91.2438%-123 - C1 -3GLH - DPO3X_ECOLI -
27 PsiBlast_CBE 91.2338%-117 - C1 -1JR3 - DPO3X_ECOLI -
36 PsiBlast_CBE 91.2138%-114 - C1 -3GLF 2.2 DPO3X_ECOLI
31 PsiBlast_CBE 91.1638%-114 - C1 -3GLI 3.9 DPO3X_ECOLI
3 PsiBlast_PDB 90.9738%-119 - C1 -3GLF 4.2 DPO3X_ECOLI
32 PsiBlast_CBE 90.6038%-108 - C1 -3GLI 4.0 DPO3X_ECOLI
35 PsiBlast_CBE 90.5438%-119 - C1 -3GLF 4.3 DPO3X_ECOLI
7 PsiBlast_PDB 90.5138%-120 - C1 -3GLG 2.2 DPO3X_ECOLI
46 PsiBlast_CBE 90.3438%-114 - C1 -3GLG 4.0 DPO3X_ECOLI
28 PsiBlast_CBE 90.3438%-115 - C1 -3GLI 4.0 DPO3X_ECOLI
45 PsiBlast_CBE 90.3238%-118 - C1 -3GLG 4.2 DPO3X_ECOLI
4 PsiBlast_PDB 89.3938%-123 - C1 -3GLI 4.2 DPO3X_ECOLI
30 PsiBlast_CBE 89.1338%-121 - C1 -3GLI 4.1 DPO3X_ECOLI
51 PsiBlast_CBE 79.1847%-111 - C1 -1NJF Error DPO3X_ECOLI
9 PsiBlast_PDB 77.6647%-112 - C1 -1NJF Error DPO3X_ECOLI
50 PsiBlast_CBE 76.7347%-111 - C1 -1NJF Error DPO3X_ECOLI