@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0179: (2016-03-13 )
MNSIIELTDYYSSNNYAPLKLVISKGKGVKVWDTDGKQYIDCISGFSVANQGHCHPTIVKAMTEQASKLSIISRVLYSDNLGKWEEKICHLAKKDKVLSLNSGTEAVEAAIKIARKWGSEVKGITDGQVEIIAMNNNFHGRTLGSLSLSNHDAYKAGFHPLLQGTTTVDFGDIEQLTQAISPNTAAIILEPIQGEGGVNIPPKGYIQAVRQLCDKHQILMIADEIQVGLGRTGKWFAMEWEQVVPDIYILGKALGGGLYPVSAVLANNDVMRVLTPGTHGSTFGGNPLAIAISTAALDVLKDEQLVERSERLGSFLLKALLQLKHPSIKEIRGRGLFIGIELNTDAAPFVDQLIQRGILCKDTHRTIIRLSPPLVIDKEEIHQIVAAFQDVFKN

Atome Classification :

(56 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

POI_C_3(1WKG)
ARGD_THET8
[Raw transfer]



PFM_A_5(2OAT)
OAT_HUMAN
[Raw transfer]



PFM_A_5(2OAT)
OAT_HUMAN
[Raw transfer]



PFM_A_5(2OAT)
OAT_HUMAN
[Raw transfer]



PFM_B_6(2OAT)
OAT_HUMAN
[Raw transfer]



PFM_C_7(2OAT)
OAT_HUMAN
[Raw transfer]



POI_D_4(1WKG)
ARGD_THET8
[Raw transfer]



P00_A_13(4JEZ)
ARGD_SALTY
[Raw transfer]



P00_A_3(4JEW)
ARGD_SALTY
[Raw transfer]



P00_B_26(4JEX)
ARGD_SALTY
[Raw transfer]



PLP_B_5(4NOG)
?
[Raw transfer]



PPE_D_4(1WKH)
ARGD_THET8
[Raw transfer]



P00_A_11(4JEX)
ARGD_SALTY
[Raw transfer]



PLP_A_3(2PB2)
ARGD_SALTY
[Raw transfer]



P00_B_19(4JEW)
ARGD_SALTY
[Raw transfer]



PLP_A_3(4NOG)
?
[Raw transfer]



PPE_C_3(1WKH)
ARGD_THET8
[Raw transfer]



PLP_A_4(2E54)
ARGD_THEMA
[Raw transfer]



P00_B_18(4JEZ)
ARGD_SALTY
[Raw transfer]



PLP_B_10(4ZWM)
?
[Raw transfer]



PLP_A_3(2ORD)
ARGD_THEMA
[Raw transfer]



PLP_B_9(4JF1)
ARGD_SALTY
[Raw transfer]



PLP_A_3(4JEY)
ARGD_SALTY
[Raw transfer]



PLP_B_13(4JEY)
ARGD_SALTY
[Raw transfer]



PLP_A_3(4ZLV)
?
[Raw transfer]



PLP_B_7(4ZLV)
?
[Raw transfer]



PLP_A_5(2BYJ)
OAT_HUMAN
[Raw transfer]



PLP_A_3(4ZWM)
?
[Raw transfer]



PMP_A_3(2GSA)
GSA_SYNP6
[Raw transfer]



PLP_A_3(4JF1)
ARGD_SALTY
[Raw transfer]



PMP_A_4(2E7U)
GSA_THET8
[Raw transfer]



PLP_B_6(2BYL)
OAT_HUMAN
[Raw transfer]



PLP_A_3(2PB0)
ARGD_SALTY
[Raw transfer]



PLP_B_6(2BYJ)
OAT_HUMAN
[Raw transfer]



PLP_C_7(2BYJ)
OAT_HUMAN
[Raw transfer]



PLP_A_3(2EO5)
?
[Raw transfer]



PLP_B_6(4PPM)
?
[Raw transfer]



PLP_A_3(2EO5)
?
[Raw transfer]



PLP_A_5(1OAT)
OAT_HUMAN
[Raw transfer]



PLP_C_7(1OAT)
OAT_HUMAN
[Raw transfer]



PLP_B_6(1OAT)
OAT_HUMAN
[Raw transfer]



PLP_C_7(2BYL)
OAT_HUMAN
[Raw transfer]



PLP_A_4(4PPM)
?
[Raw transfer]



PLP_B_4(2PB0)
ARGD_SALTY
[Raw transfer]



PLP_A_5(2BYL)
OAT_HUMAN
[Raw transfer]



PLP_B_4(1VEF)
ARGD_THET8
[Raw transfer]



PLP_A_3(1VEF)
ARGD_THET8
[Raw transfer]



PLP_A_3(1VEF)
ARGD_THET8
[Raw transfer]



PLP_B_4(2EH6)
ARGD_AQUAE
[Raw transfer]



PLP_A_3(2EH6)
ARGD_AQUAE
[Raw transfer]



PLP_A_3(2EH6)
ARGD_AQUAE
[Raw transfer]



EDO_A_7(4JEY)
ARGD_SALTY
[Raw transfer]



EDO_B_7(2PB0)
ARGD_SALTY
[Raw transfer]
111 HHSearch 90.7245%-101 - C1 -2OAT 7.5 OAT_HUMAN
112 HHSearch 87.0643%-105 - C1 -1Z7D - OAT_PLAYO -
23 PsiBlast_CBE 86.4745% -97 - C1 -1OAT 3.1 OAT_HUMAN
22 PsiBlast_CBE 85.6345% -97 - C1 -2OAT 7.9 OAT_HUMAN
4 PsiBlast_PDB 85.3245% -97 - C1 -2CAN - OAT_HUMAN -
2 PsiBlast_PDB 85.1945% -97 - C1 -1OAT 3.2 OAT_HUMAN
24 PsiBlast_CBE 85.1045% -96 - C1 -1OAT 3.3 OAT_HUMAN
27 PsiBlast_CBE 84.9945%-100 - C1 -1GBN - OAT_HUMAN -
26 PsiBlast_CBE 84.9845% -97 - C1 -2CAN - OAT_HUMAN -
6 PsiBlast_PDB 84.7145% -95 - C1 -2BYJ 3.4 OAT_HUMAN
3 PsiBlast_PDB 84.6645% -97 - C1 -2OAT 7.5 OAT_HUMAN
25 PsiBlast_CBE 84.6245% -97 - C1 -2CAN - OAT_HUMAN -
31 PsiBlast_CBE 84.4344% -98 - C1 -2BYL 3.1 OAT_HUMAN
32 PsiBlast_CBE 84.3244% -98 - C1 -2BYL 3.2 OAT_HUMAN
30 PsiBlast_CBE 84.3145% -95 - C1 -2BYJ 3.5 OAT_HUMAN
29 PsiBlast_CBE 84.2645% -95 - C1 -2BYJ 3.2 OAT_HUMAN
5 PsiBlast_PDB 84.0845% -99 - C1 -1GBN - OAT_HUMAN -
28 PsiBlast_CBE 83.9945% -99 - C1 -1GBN - OAT_HUMAN -
7 PsiBlast_PDB 83.5944% -97 - C1 -2BYL 2.9 OAT_HUMAN
114 HHSearch 82.7841% -96 * C1 *1VEF 3.6 ARGD_THET8
21 PsiBlast_CBE 82.1045% -97 - C1 -2OAT 6.6 OAT_HUMAN
101 Fugue 81.4141%-100 - C1 -2OAT 7.6 OAT_HUMAN
14 PsiBlast_PDB 77.7538% -90 - C1 -1VEF 3.6 ARGD_THET8
116 HHSearch 77.5037% -96 - C1 -2ORD 4.7 ARGD_THEMA
16 PsiBlast_PDB 77.2738% -89 - C1 -1WKH 6.0 ARGD_THET8
41 PsiBlast_CBE 77.0538% -90 - C1 -1VEF 2.6 ARGD_THET8
13 PsiBlast_PDB 75.1847% -89 - C1 -4ZWM 4.6 ?
17 PsiBlast_PDB 75.1337% -99 - C1 -2EH6 2.7 ARGD_AQUAE
125 HHSearch 75.1135%-101 - C1 -2EH6 2.8 ARGD_AQUAE
12 PsiBlast_PDB 75.1047% -85 - C1 -4ZLV 3.2 ?
15 PsiBlast_PDB 74.9838% -90 - C1 -1WKG 6.0 ARGD_THET8
11 PsiBlast_PDB 74.8347% -87 - C1 -4NOG 5.2 ?
74 PsiBlast_CBE 74.0936% -94 - C1 -2E54 4.3 ARGD_THEMA
37 PsiBlast_CBE 73.9047% -87 - C1 -4ZWM 4.4 ?
36 PsiBlast_CBE 73.6347% -86 - C1 -4NOG 4.9 ?
39 PsiBlast_CBE 73.3338% -87 - C1 -1WKH 6.8 ARGD_THET8
42 PsiBlast_CBE 73.1337% -99 - C1 -2EH6 2.7 ARGD_AQUAE
38 PsiBlast_CBE 72.8547% -88 - C1 -4ZLV 3.3 ?
40 PsiBlast_CBE 71.3938% -87 - C1 -1WKG 5.8 ARGD_THET8
77 PsiBlast_CBE 71.0235%-100 - C1 -2EO5 4.4 ?
133 HHSearch 70.7839% -98 - C1 -2EO5 4.4 ?
70 PsiBlast_CBE 70.5435% -88 - C1 -4JEY 4.5 ARGD_SALTY
65 PsiBlast_CBE 70.5036% -91 - C1 -2PB0 4.1 ARGD_SALTY
68 PsiBlast_CBE 69.9935% -87 - C1 -4JF1 4.3 ARGD_SALTY
63 PsiBlast_CBE 69.9036% -91 - C1 -2PB2 3.9 ARGD_SALTY
20 PsiBlast_PDB 69.4636% -91 - C1 -4JEZ 3.7 ARGD_SALTY
71 PsiBlast_CBE 69.1535% -90 - C1 -4JEY 4.5 ARGD_SALTY
64 PsiBlast_CBE 68.9536% -89 - C1 -2PB0 3.6 ARGD_SALTY
72 PsiBlast_CBE 68.8835% -92 - C1 -4JEX 5.6 ARGD_SALTY
49 PsiBlast_CBE 68.7236% -90 - C1 -4JEZ 2.4 ARGD_SALTY
66 PsiBlast_CBE 68.4635% -89 - C1 -4JEW 5.8 ARGD_SALTY
67 PsiBlast_CBE 68.2335% -92 - C1 -4JEW 6.7 ARGD_SALTY
69 PsiBlast_CBE 68.0435% -90 - C1 -4JF1 4.6 ARGD_SALTY
73 PsiBlast_CBE 67.1935% -91 - C1 -4JEX 3.9 ARGD_SALTY
75 PsiBlast_CBE 66.8934% -89 - C1 -4PPM 3.9 ?
76 PsiBlast_CBE 66.2134% -89 - C1 -4PPM 2.9 ?