@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0206: (2016-03-13 )
MAELKLEHIKKTYDNNNTVVKDFNLHITDKEFIVFVGPSGCGKSTTLRMVAGLESITSGDFYIDGERMNDVEPKNRDIAMVFQNYALYPHMTVFENMAFGLKLRKVNKKEIEQKVNEAAEILGLTEYLGRKPKALSGGQRQRVALGRAIVRDAKVFLMDEPLSNLDAKLRVQMRTEILKLHKRLNTTTIYVTHDQTEALTMASRIVVLKDGDIMQVGTPREIYDAPNCIFVAQFIGSPAMNMLNATVEMDGLKVGTHHFKLHNKKFEKLKAAGYLDKEIILGIRAEDIHEEPIFIQTSPETQFESEVVVSELLGSEIMVHSTFQGMELISKLDSRTQVMTNDKITLAFDMNKCHFFDEKTGNRIV

Atome Classification :

(46 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ADP_B_9(4HLU)
ECFA2_THEMA
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




ADP_A_5(4HLU)
ECFA2_THEMA
[Raw transfer]




ANP_A_6(4ZIR)
ECFA2_THEMA
[Raw transfer]




3 PsiBlast_PDB 93.5951%-110 - C2 -2D62 - ? -
13 PsiBlast_PDB 89.1647%-103 - C2 -3PUV - MALK_ECOLI -
1 PsiBlast_PDB 88.7850%-106 - C2 -4TQU - ? -
15 PsiBlast_PDB 88.2947%-102 - C2 -3PUX - MALK_ECOLI -
16 PsiBlast_PDB 88.1547%-104 - C2 -3RLF - MALK_ECOLI -
19 PsiBlast_PDB 88.0847%-104 - C2 -4KI0 - ? -
21 PsiBlast_CBE 87.7247%-103 - C2 -4KI0 - ? -
22 PsiBlast_CBE 87.4347%-104 - C2 -3RLF - MALK_ECOLI -
109 HHSearch 87.3546%-108 - C2 -1V43 - ? -
14 PsiBlast_PDB 87.3347%-100 - C2 -3PUW - MALK_ECOLI -
2 PsiBlast_PDB 86.9750%-105 - C2 -4TQV - ? -
114 HHSearch 86.7848% -95 - C2 -3RLF - MALK_ECOLI -
33 PsiBlast_CBE 86.7746%-114 - C2 -1VCI - ? -
10 PsiBlast_PDB 86.6247%-102 - C2 -3PUY - MALK_ECOLI -
23 PsiBlast_CBE 86.5847%-103 - C2 -3PUZ - MALK_ECOLI -
20 PsiBlast_PDB 86.2447% -99 - C2 -2R6G - MALK_ECOLI (first) -
12 PsiBlast_PDB 85.6747% -98 - C2 -3PV0 - MALK_ECOLI -
32 PsiBlast_CBE 85.3847%-102 - C2 -2R6G - MALK_ECOLI (first) -
34 PsiBlast_CBE 85.0343%-108 - C2 -2YYZ - ? -
18 PsiBlast_PDB 84.9847%-102 - C2 -4KHZ - ? -
48 PsiBlast_CBE 66.8236%-111 - C2 -3FVQ 7.7 FBPC_NEIG1
49 PsiBlast_CBE 65.4236%-108 - C2 -3FVQ 7.2 FBPC_NEIG1
68 PsiBlast_CBE 59.1234% -95 - C2 -2OLK 6.1 ?
72 PsiBlast_CBE 59.0934% -98 - C2 -3C41 5.8 ?
66 PsiBlast_CBE 58.2034% -93 - C2 -2OLK 6.4 ?
58 PsiBlast_CBE 58.0134% -99 - C2 -3C4J 5.2 ?
59 PsiBlast_CBE 57.4934% -97 - C2 -3C4J 6.9 ?
71 PsiBlast_CBE 57.4334% -94 - C2 -2OLJ 5.8 ?
69 PsiBlast_CBE 57.1734% -93 - C2 -2OLK 6.3 ?
73 PsiBlast_CBE 57.0134% -89 - C2 -3C41 6.7 ?
67 PsiBlast_CBE 57.0134% -92 - C2 -2OLK 6.3 ?
60 PsiBlast_CBE 56.7334% -96 - C2 -2Q0H 5.9 ?
70 PsiBlast_CBE 56.5334% -86 - C2 -2OLJ 5.9 ?
54 PsiBlast_CBE 56.3337%-102 - C2 -4YMV 5.0 ?
61 PsiBlast_CBE 56.3134% -90 - C2 -2Q0H 5.6 ?
78 PsiBlast_CBE 55.9936% -99 - C2 -4U00 4.3 ?
55 PsiBlast_CBE 55.6337% -98 - C2 -4YMV 3.7 ?
57 PsiBlast_CBE 54.0637%-103 - C2 -4YMU 4.5 ?
56 PsiBlast_CBE 53.6837%-103 - C2 -4YMU 4.9 ?
84 PsiBlast_CBE 52.4334% -83 - C2 -3TIF 5.8 Y796_METJA
81 PsiBlast_CBE 51.9634% -81 - C2 -1L2T 6.4 Y796_METJA
83 PsiBlast_CBE 51.9334% -87 - C2 -3TIF 6.2 Y796_METJA
82 PsiBlast_CBE 51.2134% -84 - C2 -1L2T 6.4 Y796_METJA
88 PsiBlast_CBE 50.4033% -86 - C2 -4HLU 4.1 ECFA2_THEMA
87 PsiBlast_CBE 50.0333% -86 - C2 -4HLU 3.3 ECFA2_THEMA
89 PsiBlast_CBE 46.9033% -86 - C2 -4ZIR 3.9 ECFA2_THEMA