@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0297: (2016-03-14 )
MLKFENVTKSFKDGNRNIEAVKDTNFEINKGDIIALVGPSGSGKSTFLTMAGALQTPTSGHILINNQDITTMKQKALAKVRMSEIGFILQATNLVPFLTVKQQFTLLKKKNKNVMSNEDYQQLMSQLGLTSLLNKLPSEISGGQKQRVAIAKALYTNPSIILADEPTAALDTENAIEVIKILRDQAKKRKKACIIVTHDERLKAYCDRSYHMKDGVLNLENETVE

Atome Classification :

(46 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_A_3(1F3O)
Y796_METJA
[Raw transfer]




ADP_A_3(3NHA)

[Raw transfer]




ADP_A_2(3NHB)

[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




ATP_C_3(1VCI)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




ATP_A_2(3NH9)

[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




ADP_A_6(3BK7)
?
[Raw transfer]




ADP_B_3(3J15)
?
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




1 PsiBlast_PDB 96.2738% -91 - C1 -1L2T - Y796_METJA -
21 PsiBlast_CBE 94.2938% -92 - C1 -1L2T 6.7 Y796_METJA
2 PsiBlast_PDB 93.5938% -93 - C1 -3TIF - Y796_METJA -
22 PsiBlast_CBE 93.2138% -95 - C1 -3TIF 6.6 Y796_METJA
5 PsiBlast_PDB 90.8635% -96 - C1 -3TUI - METN_ECOLI -
129 HHSearch 89.8136% -88 - C1 -3TIF 4.0 Y796_METJA
23 PsiBlast_CBE 89.6035% -97 - C1 -3TUZ - METN_ECOLI -
6 PsiBlast_PDB 89.2735% -98 - C1 -3TUZ - METN_ECOLI -
28 PsiBlast_CBE 88.7935% -91 - C1 -3TUI - METN_ECOLI -
4 PsiBlast_PDB 88.6835% -94 - C1 -3DHW - METN_ECOLI -
27 PsiBlast_CBE 88.3235% -93 - C1 -3TUI - METN_ECOLI -
24 PsiBlast_CBE 87.6535% -94 - C1 -3TUZ - METN_ECOLI -
26 PsiBlast_CBE 87.5735%-101 - C1 -3TUI - METN_ECOLI -
25 PsiBlast_CBE 87.3535% -91 - C1 -3TUZ - METN_ECOLI -
3 PsiBlast_PDB 86.9837% -85 - C1 -1F3O 5.8 Y796_METJA
112 HHSearch 84.5033% -87 * C1 *3TUI - METN_ECOLI -
128 HHSearch 82.4834% -87 - C1 -2PCJ - LOLD_AQUAE -
133 Fugue 82.2633% -90 - C1 -3TUZ - METN_ECOLI -
138 Fugue 81.6831% -80 - C1 -1Z47 - ? -
79 PsiBlast_CBE 81.4932% -85 - C1 -3GFO - ECFA3_CLOP1 -
31 PsiBlast_CBE 77.7436% -99 - C1 -4YMU 6.2 ?
12 PsiBlast_PDB 76.3136% -96 - C1 -4YMU 6.2 ?
50 PsiBlast_CBE 75.0031% -95 - C1 -4U00 6.0 ?
132 HHSearch 74.6835% -83 - C1 -2OLJ 6.0 ?
13 PsiBlast_PDB 74.6536% -95 - C1 -4YMV 5.6 ?
89 PsiBlast_CBE 74.0832% -85 - C1 -3NHA 6.3
30 PsiBlast_CBE 74.0336% -97 - C1 -4YMV 5.1 ?
88 PsiBlast_CBE 73.9332% -90 - C1 -3NHB 6.3
17 PsiBlast_PDB 73.4434% -92 - C1 -2OLK 5.8 ?
90 PsiBlast_CBE 73.0032% -85 - C1 -3NH9 6.2
16 PsiBlast_PDB 72.2034% -92 - C1 -2OLJ 6.0 ?
40 PsiBlast_CBE 72.1734% -90 - C1 -2OLK 5.9 ?
39 PsiBlast_CBE 72.0034% -89 - C1 -2OLK 6.1 ?
33 PsiBlast_CBE 71.9734% -98 - C1 -3C4J 4.9 ?
38 PsiBlast_CBE 71.6234% -92 - C1 -2OLK 5.9 ?
42 PsiBlast_CBE 71.1934% -93 - C1 -3C41 5.8 ?
20 PsiBlast_PDB 71.0434% -91 - C1 -3C4J 6.6 ?
34 PsiBlast_CBE 70.5934% -91 - C1 -2Q0H 5.7 ?
43 PsiBlast_CBE 70.5134% -88 - C1 -3C41 6.6 ?
19 PsiBlast_PDB 70.2934% -88 - C1 -2Q0H 5.5 ?
41 PsiBlast_CBE 70.2834% -85 - C1 -2OLJ 5.8 ?
81 PsiBlast_CBE 68.2732% -76 - C1 -4MKI 2.2 ECFA2_CALS4
82 PsiBlast_CBE 65.9332% -70 - C1 -4MKI 2.0 ECFA2_CALS4
51 PsiBlast_CBE 59.9933% -88 - C1 -1VCI 4.0 ?
110 PsiBlast_CBE 40.5532% -88 - C1 -3J15 3.5 ?
111 PsiBlast_CBE 36.9132% -86 - C1 -3BK7 3.9 ?