@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1022: (2016-03-21 )
MFHHISVMLNETIDYLNVKENGVYIDCTLGGAGHALYLLNQLNDDGRLIAIDQDQTAIDNAKEVLKDHLHKVTFVHSNFRELTQILKDLNIEKVDGIYYDLGVSSPQLDIPERGFSYHHDATLDMRMDQTQELTAYEIVNNWSYEALVKIFYRYGEEKFSKQIARRIEAHREQQPITTTLELVDIIKEGIPAKARRKGGHPAKRVFQALRIAVNDELSAFEDSIEQAIELVKVDGRISVITFHSLEDRLCKQVFQEYEKGPEVPRGLPVIPEAYTPKLKRVNRKPITATEEDLDDNNRARSAKLRVAEILK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAH_A_5(1M6Y)
RSMH_THEMA
[Raw transfer]



SAH_A_5(1M6Y)
RSMH_THEMA
[Raw transfer]



SAM_D_4(1WG8)
RSMH_THET8
[Raw transfer]



SAM_A_5(1N2X)
RSMH_THEMA
[Raw transfer]



SAM_A_2(3TKA)
RSMH_ECOLI
[Raw transfer]



SAM_A_2(3TKA)
RSMH_ECOLI
[Raw transfer]



SAM_C_3(1WG8)
RSMH_THET8
[Raw transfer]



SAM_D_4(1WG8)
RSMH_THET8
[Raw transfer]
10 PsiBlast_CBE 92.6444% -99 - C3 -1WG8 9.3 RSMH_THET8
12 HHSearch 92.0842% -98 - C3 -1M6Y 7.7 RSMH_THEMA
13 HHSearch 91.6548% -90 - C3 -1WG8 10.0 RSMH_THET8
1 PsiBlast_PDB 90.6644% -94 - C3 -1WG8 10.0 RSMH_THET8
3 PsiBlast_PDB 89.5738% -93 - C3 -1M6Y 7.7 RSMH_THEMA
2 PsiBlast_PDB 89.1341% -90 - C3 -3TKA 9.3 RSMH_ECOLI
4 PsiBlast_PDB 89.1138% -90 - C3 -1N2X 8.5 RSMH_THEMA
11 HHSearch 88.2041% -85 - C3 -3TKA 9.3 RSMH_ECOLI
16 HHSearch 49.5015% -66 - C3 -2PWY - TRMI_THET2 -
26 HHSearch 47.6821% -74 - C3 -3MB5 - TRMI_PYRAB -
17 HHSearch 47.6612% -80 - C3 -1DL5 - PIMT_THEMA -
22 HHSearch 47.6215% -69 - C3 -1I9G - TRMI_MYCTU -
5 PsiBlast_PDB 47.0623% -92 - C3 -4PON - ? -
24 HHSearch 46.9721% -94 - C3 -2YQZ - ? -
15 HHSearch 46.6720% -77 - C3 -1O54 - ? -
6 PsiBlast_PDB 46.5623% -83 - C3 -4POO - ? -
36 Fugue 46.4017% -82 - C3 -4PON - ? -
35 Fugue 46.0717% -65 - C3 -3EEY - ? -
21 HHSearch 45.1720% -64 - C3 -3DH0 - ? -
31 HHSearch 43.9617% -61 - C3 -3ORH - GAMT_HUMAN -