@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1492: (2016-03-26 )
MKFDRHRRLRSSATMRDMVRENHVRKEDLIYPIFVVEKDDVKKEIKSLPGVYQISLNLLESELKEAYDLGIRAIMFFGVPNSKDDIGTGAYIHDGVIQQATRIAKKMYDDLLIVADTCLCEYTDHGHCGVIDDHTHDVDNDKSLPLLVKTAISQVEAGADIIAPSNMMDGFVAEIRRGLDEAGYYNIPIMSYGVKYASSFFGPFRDAADSAPSFGDRKTYQMDPANRLEALRELESDLKEGCDMMIVKPALSYLDIVRDVKNHTNVPVVAYNVSGEYSMTKAAAQNGWIDEERVVMEQMVSMKRAGADMIITYFAKDICRYLDK

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PBG_A_3(1E51)
HEM2_HUMAN
[Raw transfer]




PBG_A_4(1OHL)
HEM2_YEAST
[Raw transfer]




FMT_B_14(1W5P)
HEM2_PSEAE
[Raw transfer]




FMT_A_6(1W5P)
HEM2_PSEAE
[Raw transfer]




FMT_A_3(1W5N)
HEM2_PSEAE
[Raw transfer]




FMT_B_9(1W5Q)
HEM2_PSEAE
[Raw transfer]




FMT_A_5(1W5M)
HEM2_PSEAE
[Raw transfer]




FMT_A_3(1W56)
HEM2_PSEAE
[Raw transfer]




4OX_A_2(1GJP)
HEM2_YEAST
[Raw transfer]




PB1_A_5(1PV8)
HEM2_HUMAN
[Raw transfer]




PB1_A_5(1PV8)
HEM2_HUMAN
[Raw transfer]




DSB_B_8(1I8J)
HEM2_ECOLI
[Raw transfer]




DSB_A_7(1I8J)
HEM2_ECOLI
[Raw transfer]




DSB_A_7(1L6S)
HEM2_ECOLI
[Raw transfer]




DSB_A_7(1L6S)
HEM2_ECOLI
[Raw transfer]




SHF_A_8(1B4E)
HEM2_ECOLI
[Raw transfer]




SHF_A_5(1B4K)
HEM2_PSEAE
[Raw transfer]




SHF_A_5(1B4K)
HEM2_PSEAE
[Raw transfer]




SHU_A_2(1H7R)
HEM2_YEAST
[Raw transfer]




4OX_A_7(1L6Y)
HEM2_ECOLI
[Raw transfer]




KAH_A_2(1H7P)
HEM2_YEAST
[Raw transfer]




AYC_A_2(2WOQ)
HEM2_PSEAE
[Raw transfer]




SHF_A_2(1H7N)
HEM2_YEAST
[Raw transfer]




SHF_A_3(1YLV)
HEM2_YEAST
[Raw transfer]




DSB_B_6(2C1H)
HEM2_CHLP8
[Raw transfer]




SHF_A_2(1H7N)
HEM2_YEAST
[Raw transfer]




DSB_A_2(1EB3)
HEM2_YEAST
[Raw transfer]




SHF_A_3(1W1Z)
HEM2_CHLP8
[Raw transfer]




SHF_A_3(1W1Z)
HEM2_CHLP8
[Raw transfer]




SHF_B_5(1W1Z)
HEM2_CHLP8
[Raw transfer]




DAV_A_2(1H7O)
HEM2_YEAST
[Raw transfer]




SHO_A_2(1W31)
HEM2_YEAST
[Raw transfer]




DSB_A_4(2C1H)
HEM2_CHLP8
[Raw transfer]




14 PsiBlast_PDB 95.0445%-114 - C8 -2WOQ 3.9 HEM2_PSEAE
10 PsiBlast_PDB 94.5145%-113 - C8 -1W56 3.6 HEM2_PSEAE
13 PsiBlast_PDB 94.4645%-112 - C8 -1B4K 2.6 HEM2_PSEAE
45 Fugue 94.3845%-111 - C8 -1B4K 2.6 HEM2_PSEAE
25 PsiBlast_CBE 94.1046%-118 - C8 -1W5P 3.6 HEM2_PSEAE
7 PsiBlast_PDB 94.0646%-115 - C8 -1W5P 3.6 HEM2_PSEAE
12 PsiBlast_PDB 93.8845%-112 - C8 -1GZG - HEM2_PSEAE -
8 PsiBlast_PDB 93.8346%-112 - C8 -1W5O - HEM2_PSEAE -
9 PsiBlast_PDB 93.8045%-114 - C8 -1W5N 3.7 HEM2_PSEAE
11 PsiBlast_PDB 93.6645%-111 - C8 -1W5M 3.5 HEM2_PSEAE
26 PsiBlast_CBE 93.4146%-114 - C8 -1W5O - HEM2_PSEAE -
54 HHSearch 92.6449%-110 * C8 *1W1Z 2.5 HEM2_CHLP8
24 PsiBlast_CBE 91.8946%-120 - C8 -1W5Q 3.6 HEM2_PSEAE
5 PsiBlast_PDB 91.7549%-107 - C8 -1L6Y 4.2 HEM2_ECOLI
56 HHSearch 91.2841%-108 - C8 -1H7N 3.7 HEM2_YEAST
21 PsiBlast_CBE 91.0848%-112 - C8 -2C1H 2.3 HEM2_CHLP8
38 PsiBlast_CBE 91.0342%-111 - C8 -1OHL 3.7 HEM2_YEAST
6 PsiBlast_PDB 90.6949%-103 - C8 -1I8J 2.8 HEM2_ECOLI
35 PsiBlast_CBE 90.4842%-111 - C8 -1W31 3.5 HEM2_YEAST
20 PsiBlast_PDB 90.4242%-110 - C8 -1YLV 3.3 HEM2_YEAST
55 HHSearch 90.3249% -99 - C8 -1L6S 2.3 HEM2_ECOLI
44 PsiBlast_CBE 90.2542%-108 - C8 -1EB3 3.2 HEM2_YEAST
2 PsiBlast_PDB 90.2448%-110 - C8 -2C1H 2.2 HEM2_CHLP8
22 PsiBlast_CBE 90.2048%-109 - C8 -1W1Z 3.6 HEM2_CHLP8
43 PsiBlast_CBE 90.1842%-109 - C8 -1GJP 2.4 HEM2_YEAST
42 PsiBlast_CBE 90.0842%-112 - C8 -1H7O 2.2 HEM2_YEAST
1 PsiBlast_PDB 90.0148%-113 - C8 -1W1Z 2.5 HEM2_CHLP8
40 PsiBlast_CBE 90.0042%-109 - C8 -1H7P 3.4 HEM2_YEAST
23 PsiBlast_CBE 89.7849%-102 - C8 -1I8J 3.3 HEM2_ECOLI
41 PsiBlast_CBE 89.5842%-110 - C8 -1H7N 3.7 HEM2_YEAST
4 PsiBlast_PDB 89.4149%-102 - C8 -1L6S 2.3 HEM2_ECOLI
39 PsiBlast_CBE 89.4042%-109 - C8 -1H7R 2.8 HEM2_YEAST
3 PsiBlast_PDB 88.4949%-101 - C8 -1B4E 3.7 HEM2_ECOLI
17 PsiBlast_PDB 88.2642%-116 - C8 -1E51 4.1 HEM2_HUMAN
16 PsiBlast_PDB 82.6542%-122 - C8 -1PV8 1.9 HEM2_HUMAN
59 HHSearch 81.7639%-116 - C8 -1PV8 1.9 HEM2_HUMAN