@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1854: (2016-03-29 )
MTKDILILAVETSCDETSVSVIKNGRDILSNTVLSQIESHKRFGGVVPEVASRHHVEGITTTINEALVDADVSMEDIDAIAVTEGPGLIGALLIGVNAAKALAFAYDKPLIPVHHIAGHIYANHIEEPLTFPLIALIVSGGHTELVYMKDHLSFEVIGETRDDAVGEAYDKVARTIGLNYPGGPQVDRLAAEGEDTYSFPRVWLDKDSYDFSFSGLKSAVINQLHNQRQKNIPIIEANVATSFQNSVVEVLTFKAIQACKEYSVQRLIVAGGVASNKGLRQSLADQCKVNDIQLTIPSPKLCTDNAAMIGVAGHSLYQQGRFADLALNGHSNIDLEEYSAE

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_14(4WQ5)
TSAD_ECOLI
[Raw transfer]




AGS_B_10(3ZEU)
?
[Raw transfer]




AGS_E_16(3ZEU)
?
[Raw transfer]




ATP_A_6(4WQ4)
TSAD_ECOLI
[Raw transfer]




AGS_B_10(3ZEU)
?
[Raw transfer]




ADP_B_12(4YDU)
TSAD_ECOLI
[Raw transfer]




ATP_B_9(4WQ4)
TSAD_ECOLI
[Raw transfer]




ADP_A_5(4YDU)
TSAD_ECOLI
[Raw transfer]




ATP_A_7(4WQ5)
TSAD_ECOLI
[Raw transfer]




ATP_A_3(2IVP)
KAE1_PYRAB
[Raw transfer]




ANP_A_3(2VWB)
KAE1B_METJA
[Raw transfer]




ANP_A_3(2IVN)
KAE1_PYRAB
[Raw transfer]




ANP_A_3(2IVN)
KAE1_PYRAB
[Raw transfer]




ANP_A_3(2IVN)
KAE1_PYRAB
[Raw transfer]




AMP_B_4(3ZET)
?
[Raw transfer]




AMP_A_4(3WUH)
QRI7_YEAST
[Raw transfer]




22 PsiBlast_CBE 98.9341%-103 - C5 -4WQ4 6.9 TSAD_ECOLI
2 PsiBlast_PDB 98.5641%-102 - C5 -4WQ4 6.3 TSAD_ECOLI
1 PsiBlast_PDB 98.3741% -98 - C5 -4YDU 7.2 TSAD_ECOLI
21 PsiBlast_CBE 97.5541% -98 - C5 -4YDU 6.7 TSAD_ECOLI
23 PsiBlast_CBE 97.3541% -98 - C5 -4WQ5 8.1 TSAD_ECOLI
24 PsiBlast_CBE 97.1641%-100 - C5 -3ZEU 7.6 ?
3 PsiBlast_PDB 96.7641%-100 - C5 -4WQ5 7.7 TSAD_ECOLI
5 PsiBlast_PDB 95.9441% -98 - C5 -3ZEU 8.4 ?
4 PsiBlast_PDB 95.4741% -99 - C5 -3ZET 6.6 ?
90 HHSearch 91.0938% -96 - C5 -3ZEU 7.3 ?
6 PsiBlast_PDB 84.3632%-103 - C5 -2IVN 7.0 KAE1_PYRAB
8 PsiBlast_PDB 84.3432%-104 - C5 -2IVP 6.6 KAE1_PYRAB
26 PsiBlast_CBE 84.2532%-107 - C5 -2IVO - KAE1_PYRAB -
80 Fugue 84.0631% -96 - C5 -2IVN 6.8 KAE1_PYRAB
7 PsiBlast_PDB 83.7332%-104 - C5 -2IVO - KAE1_PYRAB -
92 HHSearch 83.6631% -98 - C5 -2IVN 6.2 KAE1_PYRAB
27 PsiBlast_CBE 83.3832%-105 - C5 -2IVO - KAE1_PYRAB -
25 PsiBlast_CBE 83.1232%-107 - C5 -2IVO - KAE1_PYRAB -
9 PsiBlast_PDB 80.7029% -97 - C5 -3EN9 - KAE1B_METJA -
10 PsiBlast_PDB 80.5029%-100 - C5 -2VWB 6.1 KAE1B_METJA
11 PsiBlast_PDB 79.7930% -96 - C5 -3WUH 6.6 QRI7_YEAST