@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2129: (2016-04-01 )
MIVEVEHQRQGVDLIKIDNDETKIIFTNYGARVVSWKYHDNNIVLGNVVEADEFYHSNPFKFGASIGRYSGRIDNAKFKLKGKEYQLEKNNGEHHLHGGCHGLDNKLFDYEIRNEIAQIKVIFKTVLKSADDHFPGDIDVTITHIYDADHQWSIEYEAVASEDTLFSPMNHVYFNLNRDNNVVDNHRISSNQLDMYVLDERNIVTGDILDLHEVFEDNKIKLSDIFTSQHAQLSQQMTRFGGLDHPFTVGEHKMYVENHEFMLEVDTDMPHVVFFTFNQPDEWDSPFNIYKPHSGFTLETQFLPNDINLYGEKAPSILKAGEVFNSKTSFRIEEKVEND

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GLA_A_3(1L7K)
?
[Raw transfer]



FUC_B_4(1MMX)
?
[Raw transfer]



ARB_A_3(1MMZ)
?
[Raw transfer]



ARB_B_4(1MMZ)
?
[Raw transfer]



FUC_A_3(1MMX)
?
[Raw transfer]



GLC_B_4(1NSZ)
?
[Raw transfer]



XYS_A_3(1MN0)
?
[Raw transfer]



GAL_A_3(1NSX)
?
[Raw transfer]



XYS_B_4(1MN0)
?
[Raw transfer]



GOL_A_7(3IMH)
?
[Raw transfer]



GOL_A_8(3IMH)
?
[Raw transfer]



G6D_A_3(1MMY)
?
[Raw transfer]



G6D_B_4(1MMY)
?
[Raw transfer]
1 PsiBlast_PDB 94.5933% -65 - C4 -1L7J - ? -
23 PsiBlast_CBE 94.4433% -64 - C4 -1MMY 2.9 ?
37 PsiBlast_CBE 94.2233% -65 - C4 -1NSS - ? -
22 PsiBlast_CBE 94.1033% -63 - C4 -1MMZ 3.1 ?
38 PsiBlast_CBE 93.9033% -63 - C4 -1NSM - ? -
24 PsiBlast_CBE 93.7533% -64 - C4 -1MMX 3.7 ?
3 PsiBlast_PDB 93.7133% -65 - C4 -1MMU - ? -
15 PsiBlast_PDB 93.6333% -65 - C4 -1NSV - ? -
33 PsiBlast_CBE 93.6233% -65 - C4 -1NSZ 3.7 ?
30 PsiBlast_CBE 93.5933% -65 - C4 -1NS8 - ? -
34 PsiBlast_CBE 93.5633% -62 - C4 -1NSX - ? -
35 PsiBlast_CBE 93.5233% -66 - C4 -1NSV - ? -
26 PsiBlast_CBE 93.4633% -64 - C4 -1L7K - ? -
6 PsiBlast_PDB 93.4533% -65 - C4 -1MMZ 3.0 ?
25 PsiBlast_CBE 93.4133% -64 - C4 -1MMU - ? -
21 PsiBlast_CBE 93.3933% -61 - C4 -1MN0 3.2 ?
17 PsiBlast_PDB 93.2633% -63 - C4 -1NSZ - ? -
36 PsiBlast_CBE 93.2533% -65 - C4 -1NSU - ? -
29 PsiBlast_CBE 93.2233% -64 - C4 -1NSR - ? -
19 PsiBlast_PDB 93.0733% -66 - C4 -1NSS - ? -
7 PsiBlast_PDB 92.9433% -63 - C4 -1MN0 3.0 ?
2 PsiBlast_PDB 92.5433% -67 - C4 -1L7K 3.7 ?
4 PsiBlast_PDB 92.0833% -63 - C4 -1MMX 3.5 ?
5 PsiBlast_PDB 91.9233% -65 - C4 -1MMY 2.9 ?
51 HHSearch 91.0334% -64 * C4 *1NSX 3.4 ?