@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0271: (2015-12-14 )
MPFSKFLENLTAPFKRIKNRSLVLALGFLILTFCLLLFLILSDVSRLISSKDFLYVIQSHPKQTLIEDENYFYANKGLYKTNKEAFLRVYKIPESMPIEKRESLSKVSKIFLALLFFISSMLFGIFWRLPKRLDTKMSLESAHKNELENAFQRYDALGVRFEDIAGVNEVKEELLEVIDYLKNPKKYQDLGIFLPKGVLLVGPPGVGKTMIAKALASEARVPFFYESGSAFSQIYVGAGAKKVHELFMHAKKHAPSIIFIDEIDALGKARGGHRSDEREATLNQLLTEMDGFLQNDEVVVIGATNQMEVMDEALLRSKRFDRRIFISLPDLLERQSILEKLLENKKHALDYLKIAKICVGFSGAMLATLINESALNALKHQRKEITHGDILEVKDKIAYGKKKPQTLDENQKELVALYQSAKALSAYWLEIEFDKASLLGEFIAFNENKIHSESEIKNYIKVYLSGTIILELLYKERYSLSKQDLQKAKFLNEFMASELLLAPTKESLSVLYEEQLEFLKPQIAACKRLSALLLEQECLEHANFYDLLNG

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_2(1IY0)
FTSH_THET8
[Raw transfer]



ADP_B_2(1IY1)
FTSH_THET8
[Raw transfer]



ADP_A_2(2QZ4)

[Raw transfer]



ADP_C_6(3H4M)
PAN_METJA
[Raw transfer]



ADP_B_5(3H4M)
PAN_METJA
[Raw transfer]



ADP_A_4(3H4M)
PAN_METJA
[Raw transfer]



ADP_A_4(3H4M)
PAN_METJA
[Raw transfer]



ADP_B_7(2R65)
FTSH_HELPY
[Raw transfer]
125 Fugue 89.5838% -90 - C3 -2CE7 - FTSH_THEMA -
103 HHSearch 84.9440% -88 - C3 -2DHR - FTSH_THET8 -
5 PsiBlast_PDB 80.3744% -94 - C3 -4WW0 - FTSH_AQUAE -
38 PsiBlast_CBE 77.1844% -91 - C3 -4WW0 - FTSH_AQUAE -
37 PsiBlast_CBE 77.0544% -94 - C3 -4WW0 - FTSH_AQUAE -
35 PsiBlast_CBE 75.5744% -91 - C3 -4Z8X - FTSH_AQUAE -
6 PsiBlast_PDB 75.1144% -90 - C3 -4Z8X - FTSH_AQUAE -
36 PsiBlast_CBE 74.9144% -92 - C3 -4Z8X - FTSH_AQUAE -
1 PsiBlast_PDB 73.4641% -78 - C3 -4EIW - FTSH_THET8 -
22 PsiBlast_CBE 73.0841% -79 - C3 -4EIW - FTSH_THET8 -
2 PsiBlast_PDB 72.8141% -83 - C3 -2DHR - FTSH_THET8 -
107 HHSearch 72.2252% -87 - C3 -1IXZ - FTSH_THET8 -
30 PsiBlast_CBE 71.7341% -79 - C3 -2DHR - FTSH_THET8 -
24 PsiBlast_CBE 71.7041% -77 - C3 -4EIW - FTSH_THET8 -
27 PsiBlast_CBE 71.4241% -85 - C3 -2DHR - FTSH_THET8 -
26 PsiBlast_CBE 71.3041% -79 - C3 -2DHR - FTSH_THET8 -
29 PsiBlast_CBE 71.0441% -84 - C3 -2DHR - FTSH_THET8 -
108 HHSearch 70.6950% -86 - C3 -1LV7 - FTSH_ECOLI -
28 PsiBlast_CBE 70.6341% -78 - C3 -2DHR - FTSH_THET8 -
119 HHSearch 70.4237%-108 - C3 -3VFD - SPAST_HUMAN -
113 HHSearch 68.7744% -98 - C3 -2QZ4 7.5
10 PsiBlast_PDB 65.7052% -88 - C3 -1IY1 5.5 FTSH_THET8
13 PsiBlast_PDB 65.2442% -84 - C3 -3H4M 6.9 PAN_METJA
9 PsiBlast_PDB 65.2152% -87 - C3 -1IY0 5.7 FTSH_THET8
120 HHSearch 65.1838% -83 - C3 -3H4M 6.9 PAN_METJA
49 PsiBlast_CBE 63.7842% -88 - C3 -3H4M 6.6 PAN_METJA
50 PsiBlast_CBE 63.6842% -83 - C3 -3H4M 7.1 PAN_METJA
34 PsiBlast_CBE 62.0752% -93 - C3 -2R65 4.6 FTSH_HELPY