@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0848: (2016-03-19 )
MTKLKVTGLKKSFGANEVLKGIDIEVKEGEVVCVIGPSGSGKSTFLRCMNNLEEITAGEVVVDDFNITDKKVDINKVRENIGMVFQHFNLFPHLSVLENITLAPVELKKMDKEAAKSNALRLLEQVGLREKAEEFPNQLSGGQKQRVAIARALAMDPDIMLFDEPTSALDPEMVGEVLGVMKELAKGGMTMMIVTHEMGFAREVGDRVIFMDGGYIVEEGKPADIFDNPTNERTISFLDKVL

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]



ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]



ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]



ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]



ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]



ATP_H_8(2FGK)

[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



128_A_2(2PMK)

[Raw transfer]



ADP_B_2(2FF7)

[Raw transfer]



LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]



LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]
4 PsiBlast_PDB 97.6267%-120 - C1 -2OUK - ? -
27 PsiBlast_CBE 96.9567%-120 - C1 -2OLK - ? -
29 PsiBlast_CBE 95.8567%-120 - C1 -2OLK - ? -
122 HHSearch 95.7467%-117 - C1 -2OLJ - ? -
2 PsiBlast_PDB 95.4167%-122 - C1 -2OLJ - ? -
5 PsiBlast_PDB 94.4667%-118 - C1 -2Q0H - ? -
1 PsiBlast_PDB 93.5167%-113 - C1 -3C41 - ? -
23 PsiBlast_CBE 93.4167%-122 - C1 -2Q0H - ? -
6 PsiBlast_PDB 93.3667%-115 - C1 -3C4J - ? -
33 PsiBlast_CBE 93.2461%-113 - C1 -4U02 - ? -
22 PsiBlast_CBE 93.0167%-120 - C1 -3C4J - ? -
25 PsiBlast_CBE 92.9367%-118 - C1 -2OUK - ? -
24 PsiBlast_CBE 92.9267%-116 - C1 -2OUK - ? -
28 PsiBlast_CBE 92.9167%-119 - C1 -2OLK - ? -
35 PsiBlast_CBE 92.7961%-117 - C1 -4U02 - ? -
34 PsiBlast_CBE 92.7461%-119 - C1 -4U02 - ? -
26 PsiBlast_CBE 92.4367%-118 - C1 -2OUK - ? -
3 PsiBlast_PDB 92.3567%-116 - C1 -2OLK - ? -
12 PsiBlast_PDB 92.3361%-116 - C1 -4U00 - ? -
30 PsiBlast_CBE 92.2867%-114 - C1 -2OLJ - ? -
107 Fugue 81.2951%-119 - C1 -1B0U 5.8 HISP_SALTY
92 PsiBlast_CBE 58.6134%-102 - C1 -2FF7 5.4
95 PsiBlast_CBE 58.4934%-103 - C1 -2FGK 6.2
94 PsiBlast_CBE 57.8134%-104 - C1 -2PMK 5.5
84 PsiBlast_CBE 57.3837%-110 - C1 -4MKI 2.0 ECFA2_CALS4
83 PsiBlast_CBE 56.6237%-110 - C1 -4MKI 2.2 ECFA2_CALS4
97 PsiBlast_CBE 56.4734%-103 - C1 -2FGK 6.2 HLYBP_ECOLX
101 PsiBlast_CBE 55.7934%-101 - C1 -3FVQ 7.7 FBPC_NEIG1
98 PsiBlast_CBE 55.7434% -99 - C1 -2FGK 6.4 HLYBP_ECOLX
102 PsiBlast_CBE 55.6934%-101 - C1 -3FVQ 7.0 FBPC_NEIG1
96 PsiBlast_CBE 55.2734%-101 - C1 -2FGK 5.6 HLYBP_ECOLX