@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1681: (2016-03-27 )
MVKAISSNLGYPRLGEKREWKRALEKFWNGAISEEELLAETKALRLHALKKQQEKGIDLIPVGDFSFYDQVLDTSVTFGIIPKRFQHDGGKVSLNTYFDIARGKSDAVASEMTKWFNTNYHYIVPELADADPKVLDNRALYYYEEAKKELGIEGKPVLVGPVTYLKLGKGNDAENFEALLDKFIPAYVEILKELERAGAKWVQIDEPYLATSFDKSEIKLFEKVYQAFQTAVPNLKIELQTYFESLDYYEEVVNLPVAAIGIDFVHDHGDSLEALKAHGFPEDKYLAAGVIDGRNVWRSDLDAKLSLLTEIADYVTDGKLIVQPSNSLLHVPVTKLSEPDLDEVILGGLSFADQKLDEIAILTKALTDGAESVTAELEDARAAVTALNESSHRNNLEVQEAIANLGNVRVDRELPFAERIKLQHAWLNLPLFPTTTIGSFPQSPEVRKTRADWLKGNITDAEYNAFIEKETARWIKIQEELDIDVLVHGEFERTDMVEYFGQKLAGFQATKFGWVQSYGSRAVRPPLIYGDVAFTEEITVKESVYAQSLTKRPVKGMLTAPVTIINWSFVRDDVPESVVANQVGLALRKEVEALERNGIKVIQVDEPALREGLPLKQARWEKYLNDAVYSFKLTTASVQNDTQIHTHMCYSDFDDIIDTISALDADVISIETSRSHGEIISTFEEVTYDKEIGLGVYDIHSPRVPTVTEIQDNIRRALRAIDAKQFWINPDCGLKTRKEPETIAALQDMIKATKEVRAEYQVLEK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

39S_A_6(4QQU)
METE_CANAL
[Raw transfer]



C2F_A_3(4L65)
METE_CANAL
[Raw transfer]



THG_A_9(1U22)
METE1_ARATH
[Raw transfer]



MTX_A_4(4L6H)
METE_CANAL
[Raw transfer]



C2F_A_9(1U1J)
METE1_ARATH
[Raw transfer]



C2F_A_9(1U1J)
METE1_ARATH
[Raw transfer]



HCS_A_3(4L6H)
METE_CANAL
[Raw transfer]



MET_A_8(1U1H)
METE1_ARATH
[Raw transfer]



GLN_A_3(4L6O)
METE_CANAL
[Raw transfer]



HCS_A_8(1U22)
METE1_ARATH
[Raw transfer]
2 PsiBlast_PDB 95.9655% -70 - C2 -3T0C - METE_STRMU -
13 PsiBlast_PDB 92.9246% -71 - C2 -1U1H 3.2 METE1_ARATH
14 PsiBlast_PDB 92.7146% -71 - C2 -1U1J 4.5 METE1_ARATH
25 HHSearch 92.3246% -68 - C2 -1U1J 4.5 METE1_ARATH
1 PsiBlast_PDB 92.2155% -72 - C2 -2NQ5 - METE_STRMU -
26 HHSearch 91.8855% -72 - C2 -2NQ5 - METE_STRMU -
16 PsiBlast_PDB 91.6646% -72 - C2 -1U22 5.5 METE1_ARATH
15 PsiBlast_PDB 91.3846% -73 - C2 -1U1U - METE1_ARATH -
7 PsiBlast_PDB 90.9546% -65 - C2 -4L6H 4.9 METE_CANAL
6 PsiBlast_PDB 90.7446% -64 - C2 -4L65 5.8 METE_CANAL
9 PsiBlast_PDB 90.5746% -57 - C2 -4QQU 8.6 METE_CANAL
10 PsiBlast_PDB 90.4946% -63 - C2 -3PPH - METE_CANAL -
5 PsiBlast_PDB 90.3246% -64 - C2 -4L5Z - METE_CANAL -
27 HHSearch 90.2145% -72 * C2 *1T7L - METE_THEMA -
8 PsiBlast_PDB 89.9546% -65 - C2 -4L6O 3.0 METE_CANAL
17 PsiBlast_PDB 89.9244% -74 - C2 -1T7L - METE_THEMA -
23 PsiBlast_CBE 89.7144% -77 - C2 -3BQ5 - METE_THEMA -
11 PsiBlast_PDB 89.6146% -66 - C2 -3PPC - METE_CANAL -
4 PsiBlast_PDB 89.6046% -62 - C2 -3PPG - METE_CANAL -
19 PsiBlast_PDB 89.5844% -75 - C2 -3BQ6 - METE_THEMA -