@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0572: (2015-12-02 )
MSKKLISIVDVKDYVGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGLEKFDVIKRLNQETSVYVTGIVKEDERSKFGYELDITDLEVIGESHEYPITPKEHGTDFLMDNRHLWLRSRKQMAVMQIRNAIIYSTYEFFDQNGFIKFDSPILSENAAEDSTELFETDYFGKPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFLSHEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKRYIAEPFKRVSYDDAITLLQEHEADEDTDYEHLEHGDDFGSPHETWISNYFGVPTFVVNYPASFKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSMREDDYDALVAKMDELGMDKSEYDFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRMLHRIKP

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NSS_A_5(1X55)
SYN_PYRHO
[Raw transfer]



4AD_A_3(1X54)
SYN_PYRHO
[Raw transfer]



NSS_A_4(2XGT)
?
[Raw transfer]



4AD_A_3(1X54)
SYN_PYRHO
[Raw transfer]



AMO_A_3(3NEM)
SYD_THEKO
[Raw transfer]



NSS_A_4(2XGT)
?
[Raw transfer]



AMO_A_3(3NEM)
SYD_THEKO
[Raw transfer]



NB8_A_3(2XTI)
?
[Raw transfer]



ATP_B_10(1B8A)
SYD_THEKO
[Raw transfer]



ATP_A_9(1B8A)
SYD_THEKO
[Raw transfer]



ATP_B_4(3NEM)
SYD_THEKO
[Raw transfer]



ATP_A_9(1B8A)
SYD_THEKO
[Raw transfer]



ATP_B_8(2XTI)
?
[Raw transfer]



GOL_B_15(1E1O)
SYK2_ECOLI
[Raw transfer]



ASP_A_3(3NEL)
SYD_THEKO
[Raw transfer]



EPE_A_7(1WYD)
SYDND_SULTO
[Raw transfer]



EPE_A_7(1WYD)
SYDND_SULTO
[Raw transfer]
54 HHSearch 98.6143% -85 - C7 -1X54 8.1 SYN_PYRHO
2 PsiBlast_PDB 98.1042% -85 - C7 -1X55 7.7 SYN_PYRHO
1 PsiBlast_PDB 97.8042% -87 - C7 -1X54 8.1 SYN_PYRHO
3 PsiBlast_PDB 97.6342% -97 - C7 -1X56 - SYN_PYRHO -
53 HHSearch 91.4032% -80 * C7 *1WYD 2.4 SYDND_SULTO
21 PsiBlast_CBE 90.2233% -85 - C7 -3M4P - ? -
55 HHSearch 89.7535% -82 - C7 -3M4P - ? -
22 PsiBlast_CBE 89.5733% -92 - C7 -3M4P - ? -
12 PsiBlast_PDB 89.4730% -79 - C7 -1WYD 2.4 SYDND_SULTO
7 PsiBlast_PDB 89.4331% -85 - C7 -2XTI 8.1 ?
56 HHSearch 89.4130% -85 - C7 -3I7F - ? -
24 PsiBlast_CBE 89.1531% -86 - C7 -2XTI 6.3 ?
23 PsiBlast_CBE 89.1433% -86 - C7 -3M4P - ? -
57 HHSearch 89.0035% -80 - C7 -3NEM 8.1 SYD_THEKO
4 PsiBlast_PDB 88.9733% -83 - C7 -3M4P - ? -
5 PsiBlast_PDB 88.8533% -85 - C7 -3M4Q - ? -
6 PsiBlast_PDB 88.7631% -83 - C7 -2XGT 7.9 ?
60 HHSearch 88.4733% -77 - C7 -2XGT 7.9 ?
16 PsiBlast_PDB 87.3028% -76 - C7 -1EOV - SYDC_YEAST -
18 PsiBlast_PDB 86.9728% -78 - C7 -1ASZ - SYDC_YEAST -
9 PsiBlast_PDB 86.8633% -75 - C7 -3NEM 8.1 SYD_THEKO
26 PsiBlast_CBE 86.6033% -72 - C7 -1B8A 7.3 SYD_THEKO
25 PsiBlast_CBE 86.4833% -72 - C7 -3NEM 7.2 SYD_THEKO
11 PsiBlast_PDB 86.2433% -72 - C7 -1B8A 6.9 SYD_THEKO
8 PsiBlast_PDB 86.1733% -73 - C7 -3NEL 2.7 SYD_THEKO
73 Fugue 85.6235% -80 - C7 -1B8A 6.9 SYD_THEKO