@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0771: (2015-12-03 )
MSNQHIEELNDQQIVRREKMAALTEQGIDPFGKRFERTATSGQLNEKYADKSKEDLHDIEETATIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDSVGEENYEIFKKADLGDFLGVEGQVMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDIETIYRKRHLDLISNRDSFDRFVTRSKIISEIRRFMDSNGFLEVETPVLHNEAGGASARPFITHHNAQDIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNPEFTSIEAYQAYADYQDIMDLTEGIIQHVTKTVKGDGPINYQGTEIKINEPFKRVHMVDAVKEITGIDFWKEMTLEEAQALAQEKNVPLEKHFTTVGHIINAFFEEFVEDTLIQPTFVFGHPVEVSPLAKKNDTDPRFTDRFELFIMTKEYANAFTELNDPIDQLSRFEAQASAKELGDDEATGVDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(1E24)
SYK2_ECOLI
[Raw transfer]



LAD_B_2(1E1T)
SYK2_ECOLI
[Raw transfer]



ACP_A_3(1E22)
SYK2_ECOLI
[Raw transfer]



LAD_A_2(4UP7)
?
[Raw transfer]



ANP_A_2(4UPA)
?
[Raw transfer]



ATP_A_2(4UP9)
?
[Raw transfer]



GOL_B_9(1E1T)
SYK2_ECOLI
[Raw transfer]



GOL_B_11(1E1O)
SYK2_ECOLI
[Raw transfer]



KRS_A_4(4YCU)
SYK_HUMAN
[Raw transfer]



KRS_B_8(4YCU)
SYK_HUMAN
[Raw transfer]



LYS_B_3(1E1O)
SYK2_ECOLI
[Raw transfer]



LYS_B_3(1E1O)
SYK2_ECOLI
[Raw transfer]



LYS_A_3(4EX5)
SYK_BURTA
[Raw transfer]



LYS_B_4(4EX5)
SYK_BURTA
[Raw transfer]



LYS_C_3(1BBU)
SYK1_ECOLI
[Raw transfer]
2 PsiBlast_PDB 99.5862% -80 - C6 -3E9I - SYK_GEOSE -
22 PsiBlast_CBE 99.5562% -80 - C6 -3E9I - SYK_GEOSE -
3 PsiBlast_PDB 99.2862% -79 - C6 -3A74 - SYK_GEOSE -
28 PsiBlast_CBE 99.1462% -79 - C6 -3A74 - SYK_GEOSE -
29 PsiBlast_CBE 99.0862% -79 - C6 -3A74 - SYK_GEOSE -
1 PsiBlast_PDB 99.0562% -79 - C6 -3E9H - SYK_GEOSE -
27 PsiBlast_CBE 98.9762% -79 - C6 -3A74 - SYK_GEOSE -
26 PsiBlast_CBE 98.9362% -79 - C6 -3E9H - SYK_GEOSE -
24 PsiBlast_CBE 98.9062% -80 - C6 -3E9H - SYK_GEOSE -
25 PsiBlast_CBE 98.6462% -79 - C6 -3E9H - SYK_GEOSE -
61 HHSearch 98.6362% -78 - C6 -3A74 - SYK_GEOSE -
21 PsiBlast_CBE 98.2962% -79 - C6 -3E9I - SYK_GEOSE -
23 PsiBlast_CBE 97.7562% -78 - C6 -3E9I - SYK_GEOSE -
4 PsiBlast_PDB 93.2450% -71 - C6 -1LYL - SYK2_ECOLI -
9 PsiBlast_PDB 92.6350% -70 - C6 -1BBU 2.8 SYK1_ECOLI
30 PsiBlast_CBE 92.2350% -72 - C6 -1LYL - SYK2_ECOLI -
31 PsiBlast_CBE 91.9550% -71 - C6 -1LYL - SYK2_ECOLI -
8 PsiBlast_PDB 91.7250% -72 - C6 -1E24 6.9 SYK2_ECOLI
6 PsiBlast_PDB 91.6550% -71 - C6 -1E1T 8.1 SYK2_ECOLI
5 PsiBlast_PDB 91.5850% -71 - C6 -1E1O 3.1 SYK2_ECOLI
7 PsiBlast_PDB 91.1550% -71 - C6 -1E22 6.7 SYK2_ECOLI
60 HHSearch 91.0250% -70 - C6 -1E1O 3.1 SYK2_ECOLI
11 PsiBlast_PDB 88.2449% -67 - C6 -4EX5 3.1 SYK_BURTA
32 PsiBlast_CBE 88.1349% -68 - C6 -4EX5 3.0 SYK_BURTA
39 PsiBlast_CBE 85.4442% -56 - C6 -4YCU 6.5 SYK_HUMAN
15 PsiBlast_PDB 84.9742% -54 - C6 -4YCU 6.1 SYK_HUMAN
20 PsiBlast_PDB 75.6635% -67 - C6 -4UPA 5.9 ?
19 PsiBlast_PDB 73.8235% -66 - C6 -4UP9 5.2 ?
17 PsiBlast_PDB 73.3835% -61 - C6 -4UP7 6.4 ?