@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1086: (2015-12-05 )
MGYTVAIVGATGAVGTQMIRQLEQSNLPIEQVKLLSSSRSAGKILHFKDEAIRVEETTKESFYDVDIALFSAGGSISAKFAPYAVKSGAVVVDNTSYFRQNPDVPLVVPEVNAHAMIGHNGIIACPNCSTIQMMIALEPIRQKWGIERVIVSTYQAVSGSGARAVEETKEQLRQVLNDNLSPDQLIATVLPCSSDQKHYPIAFNALPQIDIFTDNDYTYEEMKMTLETKKIMEDATIKVSATCVRIPVLSGHSESIYIETKELASISEIKKAIANFPGAVLQDLPSQQIYPQAINAVGHRETFVGRIRKDLDQENGVHMWVVSDNLLKGAAWNSVQIAETLHKNGLVKPAKELKFELI

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3JL_A_3(4R4J)
?
[Raw transfer]




3JN_A_9(4R5H)
?
[Raw transfer]




3JL_B_9(4R4J)
?
[Raw transfer]




11C_A_3(3PWS)
?
[Raw transfer]




12T_B_13(3PYX)
?
[Raw transfer]




3GQ_B_13(4R3N)
?
[Raw transfer]




4NO_A_3(4R41)
?
[Raw transfer]




NAP_B_11(4R4J)
?
[Raw transfer]




3JM_A_7(4R54)
?
[Raw transfer]




3GQ_A_6(4R3N)
?
[Raw transfer]




4NO_B_13(4R41)
?
[Raw transfer]




11C_B_6(3PWS)
?
[Raw transfer]




GOL_A_2(3VOS)
DHAS_MYCTU
[Raw transfer]




NAP_A_6(4R51)
?
[Raw transfer]




NAP_A_5(4R3N)
?
[Raw transfer]




NAP_B_12(4R3N)
?
[Raw transfer]




NAP_A_10(4R5H)
?
[Raw transfer]




NAP_A_4(4R4J)
?
[Raw transfer]




NAP_A_4(3PZB)
?
[Raw transfer]




NAP_A_5(4R54)
?
[Raw transfer]




NAP_B_9(3PYX)
?
[Raw transfer]




NAP_A_3(3PYX)
?
[Raw transfer]




NAP_B_9(3PZB)
?
[Raw transfer]




MLA_A_7(1YS4)
DHAS_METJA
[Raw transfer]




NAP_B_9(4R54)
?
[Raw transfer]




NAP_B_9(3Q11)
?
[Raw transfer]




NAP_B_15(4R5H)
?
[Raw transfer]




NAP_B_15(4R51)
?
[Raw transfer]




2RA_A_3(3PZB)
?
[Raw transfer]




2RA_B_8(3PZB)
?
[Raw transfer]




NAP_A_3(3Q11)
?
[Raw transfer]




NAP_A_4(4R41)
?
[Raw transfer]




NAP_B_14(4R41)
?
[Raw transfer]




A2P_B_7(3PWS)
?
[Raw transfer]




A2P_A_8(4R3W)
?
[Raw transfer]




A2P_A_5(3PWS)
?
[Raw transfer]




25A_B_10(3PWK)
?
[Raw transfer]




A2P_B_16(4R3W)
?
[Raw transfer]




25A_A_3(3PWK)
?
[Raw transfer]




CYS_A_2(3TZ6)
DHAS_MYCTU
[Raw transfer]




CYS_A_2(3TZ6)
DHAS_MYCTU
[Raw transfer]




16 PsiBlast_PDB 99.1175% -98 - C2 -4R51 10.1 ?
22 PsiBlast_CBE 98.8675% -99 - C2 -4R54 7.5 ?
24 PsiBlast_CBE 98.7575% -98 - C2 -4R4J 9.0 ?
18 PsiBlast_PDB 98.7375% -96 - C2 -4R5H 8.9 ?
14 PsiBlast_PDB 98.5375% -97 - C2 -4R41 6.8 ?
10 PsiBlast_PDB 98.5275% -95 - C2 -3Q11 6.6 ?
32 PsiBlast_CBE 98.4975% -98 - C2 -3PZB 9.8 ?
37 PsiBlast_CBE 98.3775% -97 - C2 -3PWK 7.5 ?
21 PsiBlast_CBE 98.3175% -97 - C2 -4R5H 6.6 ?
12 PsiBlast_PDB 98.2275% -96 - C2 -4R3N 10.3 ?
8 PsiBlast_PDB 98.1875% -95 - C2 -3PYX 9.7 ?
36 PsiBlast_CBE 98.1675% -96 - C2 -3PWS 6.5 ?
3 PsiBlast_PDB 98.1375%-100 - C2 -2GZ2 - ? -
29 PsiBlast_CBE 98.1275% -98 - C2 -3Q1L - ? -
33 PsiBlast_CBE 98.0875% -93 - C2 -3PYX 9.7 ?
34 PsiBlast_CBE 98.0075% -97 - C2 -3PYL - ? -
2 PsiBlast_PDB 98.0075% -95 - C2 -2GZ1 - ? -
17 PsiBlast_PDB 97.9675% -96 - C2 -4R54 9.9 ?
5 PsiBlast_PDB 97.9575% -98 - C2 -3PWK 6.8 ?
6 PsiBlast_PDB 97.9075% -98 - C2 -3PWS 6.5 ?
15 PsiBlast_PDB 97.8775% -92 - C2 -4R4J 9.8 ?
31 PsiBlast_CBE 97.7675% -97 - C2 -3Q11 7.5 ?
13 PsiBlast_PDB 97.6775% -96 - C2 -4R3W 5.3 ?
9 PsiBlast_PDB 97.5575% -98 - C2 -3PZB 9.4 ?
23 PsiBlast_CBE 97.5275% -99 - C2 -4R51 8.2 ?
26 PsiBlast_CBE 97.2375% -99 - C2 -4R3W 5.7 ?
27 PsiBlast_CBE 97.1675%-100 - C2 -4R3N 9.1 ?
25 PsiBlast_CBE 96.4375% -97 - C2 -4R41 6.2 ?
44 PsiBlast_CBE 74.0138% -81 - C2 -3TZ6 4.0 DHAS_MYCTU
43 PsiBlast_CBE 73.4038% -81 - C2 -3VOS 2.4 DHAS_MYCTU
48 HHSearch 72.4139% -79 - C2 -3TZ6 4.0 DHAS_MYCTU
59 HHSearch 70.0939% -78 - C2 -1YS4 2.9 DHAS_METJA