@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1467: (2015-12-08 )
MSKILVFGHQNPDSDAIGSSVAFAYLAKEAWGLDTEAVALGTPNEETAYVLDYFGVQAPRVVESAKAEGVETVILTDHNEFQQSISDIKDVTVYGVVDHHRVANFETANPLYMRLEPVGSASSIVYRMFKENGVSVPKELAGLLLSGLISDTLLLKSPTTHASDIPVAKELAEIAGVNLEEYGLEMLKAGTNLSSKTAAELIDIDAKTFELNGEAVRVAQVNTVDINDILARQEEIEVAIQEAIVTEGYSDFVLMITDIVNSNSEILALGSNMAKVEAAFEFTLENNHAFLAGAVSRKKQVVPQLTESYNA

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2PN_A_6(2ENX)
PPAC_STRA5
[Raw transfer]



2PN_B_11(2ENX)
PPAC_STRA5
[Raw transfer]



2PN_A_9(2IW4)
PPAC_BACSU
[Raw transfer]



2PN_A_21(2HAW)
PPAC_BACSU
[Raw transfer]



2PN_A_21(2HAW)
PPAC_BACSU
[Raw transfer]



2PN_B_22(2HAW)
PPAC_BACSU
[Raw transfer]



2PN_B_20(2IW4)
PPAC_BACSU
[Raw transfer]



GOL_B_11(1K20)
PPAC_STRGC
[Raw transfer]



GOL_A_12(1K20)
PPAC_STRGC
[Raw transfer]



GOL_A_12(1K20)
PPAC_STRGC
[Raw transfer]



GOL_A_12(1K20)
PPAC_STRGC
[Raw transfer]



GOL_A_12(1K20)
PPAC_STRGC
[Raw transfer]
1 PsiBlast_PDB 96.6899% -98 - C2 -2ENX 3.3 PPAC_STRA5
21 PsiBlast_CBE 95.6599% -94 - C2 -2ENX 3.8 PPAC_STRA5
22 PsiBlast_CBE 94.3783%-105 - C2 -1WPP - PPAC_STRGC -
2 PsiBlast_PDB 93.8983%-104 - C2 -1WPP - PPAC_STRGC -
38 Fugue 93.0483% -91 - C2 -1K20 2.7 PPAC_STRGC
3 PsiBlast_PDB 93.0483% -91 - C2 -1K20 2.7 PPAC_STRGC
23 PsiBlast_CBE 92.7283% -92 - C2 -1K20 2.5 PPAC_STRGC
4 PsiBlast_PDB 90.6078% -96 - C2 -1I74 - PPAC_STRMU -
6 PsiBlast_PDB 83.3557% -87 - C2 -2HAW 4.1 PPAC_BACSU
7 PsiBlast_PDB 83.2457% -88 - C2 -2IW4 4.0 PPAC_BACSU
25 PsiBlast_CBE 83.0457% -88 - C2 -1WPM - PPAC_BACSU -
26 PsiBlast_CBE 82.9757% -87 - C2 -2IW4 4.3 PPAC_BACSU
5 PsiBlast_PDB 82.8657% -89 - C2 -1WPM - PPAC_BACSU -
24 PsiBlast_CBE 82.6157% -87 - C2 -2HAW 4.2 PPAC_BACSU
30 HHSearch 82.3656% -84 * C2 *2HAW 4.1 PPAC_BACSU
8 PsiBlast_PDB 81.8356%-101 - C2 -1K23 - PPAC_BACSU -
10 PsiBlast_PDB 75.7540% -80 - C2 -2EB0 - PPAC_METJA -
29 HHSearch 75.7240% -78 - C2 -2EB0 - PPAC_METJA -
28 PsiBlast_CBE 75.1440% -82 - C2 -2EB0 - PPAC_METJA -
40 Fugue 74.5684%-112 - C2 -1K20 2.8 PPAC_STRGC
42 Fugue 56.7781% -87 - C2 -1K20 2.4 PPAC_STRGC