@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1748: (2015-12-10 )
MLTMIKNGDSIAVVNGDIELSYKDIDRQSNSFANGLLKAGFKCGDKIVLQLPNYHEFIIIAFAMFKVGIIPIMSLPAHRKNELKGIIEKSEAVAYIAKDKYLGFSYVDMIRDIKIESDREFKVYILGEGDEFKKFSELNDNNYIYQKTEVDYKNIGLLLLSGGTTRIPKLIPRRHCDYLYVAKKTSIISGMDRGSIYLAALPMAHNFPLCCPGILGTFAVGGKVVVCEVTSPDEILPLIEEEKVTITGFVPAIANICMDYLQYEDYDLSSLKIL

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IXN_A_3(3O83)
?
[Raw transfer]



IXN_B_8(3O83)
?
[Raw transfer]



HP8_A_3(3O82)
?
[Raw transfer]



HP8_B_6(3O82)
?
[Raw transfer]



H89_A_3(3U16)
?
[Raw transfer]



H89_B_9(3U16)
?
[Raw transfer]



HTJ_A_3(3O84)
?
[Raw transfer]



HTJ_B_8(3O84)
?
[Raw transfer]



H90_B_9(3U17)
?
[Raw transfer]



H90_A_3(3U17)
?
[Raw transfer]



1HZ_A_3(4IZ6)
ENTE_ECOLI
[Raw transfer]



AMP_D_4(1MDB)
DHBE_BACSU
[Raw transfer]



AMP_D_4(1MDB)
DHBE_BACSU
[Raw transfer]



AMP_A_2(1MD9)
DHBE_BACSU
[Raw transfer]
1 PsiBlast_PDB 96.7741%-118 - C5 -1MDB 2.9 DHBE_BACSU
2 PsiBlast_PDB 95.4341%-116 - C5 -1MDF - DHBE_BACSU -
3 PsiBlast_PDB 95.1840%-116 - C5 -1MD9 2.7 DHBE_BACSU
38 HHSearch 93.4941%-118 - C5 -1MDB 2.9 DHBE_BACSU
28 PsiBlast_CBE 92.2132%-110 - C5 -3RG2 - ENTB_ECOLI (first) -
26 PsiBlast_CBE 91.1432%-108 - C5 -3RG2 - ENTB_ECOLI (first) -
29 PsiBlast_CBE 90.9132%-108 - C5 -3RG2 - ENTB_ECOLI (first) -
24 PsiBlast_CBE 90.7832%-109 - C5 -3RG2 - ENTB_ECOLI (first) -
23 PsiBlast_CBE 90.6032%-111 - C5 -3RG2 - ENTB_ECOLI (first) -
5 PsiBlast_PDB 90.6032%-107 - C5 -3RG2 - ENTB_ECOLI (first) -
30 PsiBlast_CBE 90.5432%-109 - C5 -3RG2 - ENTB_ECOLI (first) -
22 PsiBlast_CBE 89.7932%-107 - C5 -3RG2 - ENTB_ECOLI (first) -
25 PsiBlast_CBE 89.5332%-110 - C5 -3RG2 - ENTB_ECOLI (first) -
21 PsiBlast_CBE 89.5032%-109 - C5 -4IZ6 - ENTE_ECOLI -
4 PsiBlast_PDB 88.8132%-109 - C5 -4IZ6 2.8 ENTE_ECOLI
27 PsiBlast_CBE 88.7932%-112 - C5 -3RG2 - ENTB_ECOLI (first) -
35 PsiBlast_CBE 88.2931%-119 * C5 *3O82 2.8 ?
32 PsiBlast_CBE 88.0231%-121 - C5 -3U16 5.9 ?
6 PsiBlast_PDB 87.9831%-121 - C5 -3O82 2.9 ?
8 PsiBlast_PDB 87.9031%-122 - C5 -3O84 5.3 ?
9 PsiBlast_PDB 87.8831%-123 - C5 -3U16 5.9 ?
34 PsiBlast_CBE 87.8431%-122 - C5 -3O83 2.2 ?
31 PsiBlast_CBE 87.6731%-121 - C5 -3U17 5.7 ?
33 PsiBlast_CBE 87.6531%-122 - C5 -3O84 5.4 ?
7 PsiBlast_PDB 87.4231%-123 - C5 -3O83 2.6 ?
10 PsiBlast_PDB 86.8431%-122 - C5 -3U17 5.8 ?