@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu00090: (2016-06-01 )
MWESKFSKEGLTFDDVLLVPAKSEVLPRDVDLSVELTKTLKLNIPVISAGMDTVTESAMAIAMARQGGLGIIHKNMSIEQQAEQVDKVKRSERGVITNPFFLTPDHQVFDAEHLMGKYRISGVPIVNNEEDQKLVGIITNRDLRFISDYSMKISDVMTKEELVTASVGTTLDEAEKILQKHKIEKLPLVDDQNKLKGLITIKDIEKVIEFPNSSKDIHGRLIVGAAVGVTGDTMTRVKKLVEANVDVIVIDTAHGHSQGVLNTVTKIRETYPELNIIAGNVATAEATRALIEAGADVVKVGIGPGSICTTRVVAGVGVPQITAIYDCATEARKHGKTIIADGGIKFSGDITKALAAGGHAVMLGSLLAGTSESPGETEIYQGRRFKVYRGMGSVAAMEKGSKDRYFQEENKKFVPEGIEGRTPYKGPVEETVYQLVGGLRSGMGYCGSKDLRALREEAQFIRMTGAGLRESHPHDVQITKESPNYTIS

Atome Classification :

(52 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAJ_A_4(4QNE)
?
[Raw transfer]




NAD_B_8(4X3Z)
?
[Raw transfer]




NAD_A_4(4X3Z)
?
[Raw transfer]




NAD_A_4(4X3Z)
?
[Raw transfer]




NAJ_B_7(4QNE)
?
[Raw transfer]




IMP_U_21(1JR1)
IMDH2_CRIGR
[Raw transfer]




IMP_A_3(5AHM)
?
[Raw transfer]




IMP_B_6(4FO4)
?
[Raw transfer]




IMP_A_3(4FO4)
?
[Raw transfer]




IMP_A_2(4FXS)
?
[Raw transfer]




IMP_A_2(4FXS)
?
[Raw transfer]




IMP_A_2(4R7J)
?
[Raw transfer]




IMP_A_5(4IX2)
?
[Raw transfer]




IMP_B_6(4IX2)
?
[Raw transfer]




XMP_A_3(2CU0)
IMDH_PYRHO
[Raw transfer]




XMP_A_3(2CU0)
IMDH_PYRHO
[Raw transfer]




IMP_A_17(1JR1)
IMDH2_CRIGR
[Raw transfer]




RVP_Y_25(1NF7)
IMDH2_HUMAN
[Raw transfer]




IMP_A_4(4AF0)
?
[Raw transfer]




RVP_A_4(1ME8)
IMDH_TRIFO
[Raw transfer]




IMP_B_6(4AF0)
?
[Raw transfer]




IMP_A_4(4AF0)
?
[Raw transfer]




IMP_C_8(4IX2)
?
[Raw transfer]




IMP_D_11(4IX2)
?
[Raw transfer]




XMP_A_2(4QQ3)
?
[Raw transfer]




XMP_A_3(3TSD)
?
[Raw transfer]




MYD_U_21(1NF7)
IMDH2_HUMAN
[Raw transfer]




NAD_A_3(4ZQM)
IMDH_MYCTU
[Raw transfer]




CPR_A_9(1NFB)
IMDH2_HUMAN
[Raw transfer]




CPR_B_13(1NFB)
IMDH2_HUMAN
[Raw transfer]




IMP_A_3(3USB)
?
[Raw transfer]




Q21_B_13(4MY8)
?
[Raw transfer]




2EY_B_8(4MYA)
?
[Raw transfer]




2EY_A_4(4MYA)
?
[Raw transfer]




IMP_A_3(3USB)
?
[Raw transfer]




Q21_B_18(4MY8)
?
[Raw transfer]




Q21_A_6(4MY8)
?
[Raw transfer]




2EY_A_4(4MYA)
?
[Raw transfer]




IMP_A_2(5AHN)
?
[Raw transfer]




IMP_A_2(5AHN)
?
[Raw transfer]




39H_A_6(4QM1)
?
[Raw transfer]




39H_C_9(4QM1)
?
[Raw transfer]




39H_B_8(4QM1)
?
[Raw transfer]




39H_C_10(4QM1)
?
[Raw transfer]




1 PsiBlast_PDB 96.4980% -84 - C2 -3TSB - ? -
106 HHSearch 92.0169%-102 - C- -1ZFJ - IMDH_STRPY -
4 PsiBlast_PDB 91.3466%-101 - C- -1ZFJ - IMDH_STRPY -
105 HHSearch 90.6580% -95 - C2 -3USB 4.7 ?
2 PsiBlast_PDB 90.5980% -92 - C2 -3TSD 6.0 ?
3 PsiBlast_PDB 89.7877% -95 - C2 -3USB 4.7 ?
114 HHSearch 88.4257% -86 - C2 -4FXS 6.7 ?
6 PsiBlast_PDB 87.7855% -85 - C2 -4FXS 6.7 ?
118 HHSearch 83.6879% -95 - C2 -4MYA 5.8 ?
81 PsiBlast_CBE 80.6841% -83 - C2 -4Z87 - ? -
9 PsiBlast_PDB 80.4955% -92 - C2 -4DQW - ? -
121 HHSearch 80.3865% -90 - C2 -4Q32 - ? -
21 PsiBlast_CBE 80.0455% -96 - C2 -4DQW - ? -
117 HHSearch 79.9162% -93 - C2 -4X3Z 5.7 ?
122 HHSearch 79.1258% -84 - C2 -4R7J 6.8 ?
69 PsiBlast_CBE 76.3941% -79 - C2 -1JR1 6.1 IMDH2_CRIGR
65 PsiBlast_CBE 76.1141% -82 - C2 -1NF7 5.0 IMDH2_HUMAN
64 PsiBlast_CBE 75.8741% -83 - C2 -1NF7 5.0 IMDH2_HUMAN
109 HHSearch 75.1851% -79 - C2 -2CU0 6.7 IMDH_PYRHO
113 HHSearch 74.8661% -85 - C2 -1VRD - ? -
12 PsiBlast_PDB 74.6750% -78 - C2 -2CU0 6.7 IMDH_PYRHO
123 HHSearch 73.8356% -86 - C2 -4ZQM 6.2 IMDH_MYCTU
112 HHSearch 73.3442% -76 - C2 -4AF0 6.8 ?
82 PsiBlast_CBE 72.8343% -80 - C2 -4AF0 6.7 ?
68 PsiBlast_CBE 72.4841% -81 - C2 -1JR1 6.1 IMDH2_CRIGR
83 PsiBlast_CBE 72.2043% -83 - C2 -4AF0 6.8 ?
108 HHSearch 72.1256% -93 - C2 -5AHN 5.0 ?
10 PsiBlast_PDB 71.9655% -93 - C2 -5AHN 5.0 ?
63 PsiBlast_CBE 71.3441% -85 - C2 -1NFB 5.1 IMDH2_HUMAN
62 PsiBlast_CBE 70.9741% -83 - C2 -1NFB 5.2 IMDH2_HUMAN
34 PsiBlast_CBE 70.8378% -93 - C2 -4MYA 5.6 ?
110 HHSearch 70.6735% -77 - C2 -1ME8 6.6 IMDH_TRIFO
15 PsiBlast_PDB 69.4778% -90 - C2 -4MYA 5.7 ?
26 PsiBlast_CBE 68.8278% -96 - C2 -4QM1 5.1 ?
13 PsiBlast_PDB 68.2978% -92 - C2 -4MY8 5.6 ?
43 PsiBlast_CBE 68.1878% -97 - C2 -4MY8 5.7 ?
24 PsiBlast_CBE 67.7078% -93 - C2 -4QM1 4.9 ?
80 PsiBlast_CBE 67.2163% -81 - C2 -4FO4 6.0 ?
44 PsiBlast_CBE 67.1778% -92 - C2 -4MY8 5.1 ?
79 PsiBlast_CBE 66.5463% -79 - C2 -4FO4 6.3 ?
25 PsiBlast_CBE 66.5078% -95 - C2 -4QM1 5.0 ?
18 PsiBlast_PDB 66.2978% -92 - C2 -4QM1 4.8 ?
70 PsiBlast_CBE 66.2763% -82 - C2 -4X3Z 5.0 ?
74 PsiBlast_CBE 65.3963% -78 - C2 -4QNE 5.8 ?
73 PsiBlast_CBE 65.3663% -79 - C2 -4QNE 5.2 ?
71 PsiBlast_CBE 65.2863% -80 - C2 -4X3Z 5.6 ?
77 PsiBlast_CBE 65.0363% -79 - C2 -4IX2 4.1 ?
78 PsiBlast_CBE 64.3963% -82 - C2 -4IX2 5.1 ?
75 PsiBlast_CBE 64.3363% -86 - C2 -4IX2 5.6 ?
76 PsiBlast_CBE 64.2863% -82 - C2 -4IX2 6.1 ?
100 PsiBlast_CBE 63.8259% -80 - C2 -5AHM 6.4 ?
72 PsiBlast_CBE 61.1263% -95 - C2 -4QQ3 6.9 ?