@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu11460: (2016-06-18 )
MIRVTRLLEVKDLAISFKTYGGEVQAIRGVNFHLDKGETLAIVGESGSGKSVTSQAIMKLIPMPPGYFKRGEILFEGKDLVPLSEKEMQNVRGKEIGMIFQDPMTSLNPTMKVGKQITEVLFKHEKISKEAAKKRAVELLELVGIPMPEKRVNQFPHEFSGGMRQRVVIAMALAANPKLLIADEPTTALDVTIQAQILELMKDLQKKIDTSIIFITHDLGVVANVADRVAVMYAGQIVETGTVDEIFYDPRHPYTWGLLASMPTLESSGEEELTAIPGTPPDLTNPPKGDAFALRSSYAMKIDFEQEPPMFKVSDTHYVKSWLLHPDAPKVEPPEAVKAKMRKLANTFEKPVLVREVE

Atome Classification :

(45 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ATP_B_3(4FWI)
?
[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_C_11(1XEF)
HLYBP_ECOLX
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_D_12(1XEF)

[Raw transfer]




ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ATP_G_7(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ADP_B_10(1G9X)
LIVG_METJA
[Raw transfer]




ADP_B_2(2FFA)

[Raw transfer]




ADP_B_2(2FFB)

[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




ADP_A_4(1G6H)
LIVG_METJA
[Raw transfer]




ADP_A_8(1G9X)
LIVG_METJA
[Raw transfer]




ADP_C_12(1G9X)
LIVG_METJA
[Raw transfer]




91 HHSearch 93.2539%-118 - C1 -4FWI - ? -
1 PsiBlast_PDB 88.2539%-111 - C1 -4FWI 5.8 ?
81 Fugue 78.3229%-128 - C1 -3TUZ - METN_ECOLI -
93 HHSearch 74.7435%-146 - C1 -3TUI - METN_ECOLI -
3 PsiBlast_PDB 72.7533%-135 - C1 -3TUI - METN_ECOLI -
4 PsiBlast_PDB 72.4933%-141 - C1 -3TUZ - METN_ECOLI -
21 PsiBlast_CBE 71.6633%-141 - C1 -3TUZ - METN_ECOLI -
24 PsiBlast_CBE 71.5033%-141 - C1 -3TUI - METN_ECOLI -
36 PsiBlast_CBE 70.6334%-130 - C1 -2OLK - ? -
26 PsiBlast_CBE 70.3133%-133 - C1 -3TUI - METN_ECOLI -
30 PsiBlast_CBE 70.2634%-129 - C1 -3C4J - ? -
9 PsiBlast_PDB 70.0934%-132 - C1 -2OLK - ? -
22 PsiBlast_CBE 69.9933%-136 - C1 -3TUZ - METN_ECOLI -
87 Fugue 69.6529%-105 - C1 -3B60 - MSBA_SALTY -
25 PsiBlast_CBE 69.4833%-134 - C1 -3TUI - METN_ECOLI -
10 PsiBlast_PDB 69.4334%-129 - C1 -2OUK - ? -
33 PsiBlast_CBE 69.0434%-125 - C1 -2OUK - ? -
32 PsiBlast_CBE 68.9734%-126 - C1 -2OUK - ? -
23 PsiBlast_CBE 68.8333%-137 - C1 -3TUZ - METN_ECOLI -
39 PsiBlast_CBE 68.8034%-128 - C1 -3C41 5.8 ?
35 PsiBlast_CBE 68.6634%-128 - C1 -2OLK 5.6 ?
37 PsiBlast_CBE 68.1234%-125 - C1 -2OLK 5.5 ?
13 PsiBlast_PDB 67.6034%-120 - C1 -3C41 6.2 ?
73 PsiBlast_CBE 60.5731%-111 - C1 -1B0U 5.3 HISP_SALTY
77 PsiBlast_CBE 50.2831%-130 - C1 -1G6H 4.6 LIVG_METJA
79 PsiBlast_CBE 49.4931%-134 - C1 -1G9X 4.1 LIVG_METJA
66 PsiBlast_CBE 48.9832%-145 - C1 -2FGJ 5.0 HLYBP_ECOLX
70 PsiBlast_CBE 48.6432%-147 - C1 -1XEF 4.7 HLYBP_ECOLX
69 PsiBlast_CBE 48.2132%-145 - C1 -1XEF 4.7
50 PsiBlast_CBE 47.8732%-141 - C1 -2FF7 3.9
49 PsiBlast_CBE 47.7532%-146 - C1 -2PMK 4.1
68 PsiBlast_CBE 47.6232%-142 - C1 -2FFA 4.2
65 PsiBlast_CBE 47.4332%-140 - C1 -2FGJ 4.5 HLYBP_ECOLX
71 PsiBlast_CBE 47.0832%-143 - C1 -1XEF 4.8 HLYBP_ECOLX
64 PsiBlast_CBE 46.7732%-142 - C1 -2FGJ 4.4
67 PsiBlast_CBE 46.4532%-139 - C1 -2FGJ 4.8 HLYBP_ECOLX
72 PsiBlast_CBE 46.3032%-141 - C1 -1XEF 4.4 HLYBP_ECOLX
80 PsiBlast_CBE 46.2331%-123 - C1 -1G9X 3.6 LIVG_METJA
59 PsiBlast_CBE 46.1932%-138 - C1 -2FFB 3.9
78 PsiBlast_CBE 45.5131%-123 - C1 -1G9X 3.5 LIVG_METJA
54 PsiBlast_CBE 45.4932%-145 - C1 -3B5J 4.1
58 PsiBlast_CBE 43.3132%-135 - C1 -2FGK 5.2 HLYBP_ECOLX
57 PsiBlast_CBE 43.0732%-136 - C1 -2FGK 4.9 HLYBP_ECOLX
55 PsiBlast_CBE 42.3932%-134 - C1 -2FGK 5.0
56 PsiBlast_CBE 42.0932%-134 - C1 -2FGK 4.4 HLYBP_ECOLX