@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu11880: (2016-06-18 )
MSKHNWTLETQLVHNPFKTDGGTGAVSVPIQHASTFHQSSFEEFGAYDYSRSGTPTRTALEETIAALEGGTRGFAFSSGMAAISTAFLLLSQGDHVLVTEDVYGGTFRMVTEVLTRFGIEHTFVDMTDRNEVARSIKPNTKVIYMETPSNPTLGITDIKAVVQLAKENGCLTFLDNTFMTPALQRPLDLGVDIVLHSATKFLSGHSDVLSGLAAVKDEELGKQLYKLQNAFGAVLGVQDCWLVLRGLKTLQVRLEKASQTAQRLAEFFQKHPAVKRVYYPGLADHPGAETHKSQSTGAGAVLSFELESKEAVKKLVENVSLPVFAVSLGAVESILSYPATMSHAAMPKEEREKRGITDGLLRLSVGVEHADDLEHDFEQALKEIAPVSVR

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PLG_A_2(4HF8)
?
[Raw transfer]




PPJ_A_3(1E5E)
?
[Raw transfer]




PPJ_A_3(1E5E)
?
[Raw transfer]




LCS_A_2(4OMA)
?
[Raw transfer]




PLP_B_8(1E5F)
?
[Raw transfer]




PPJ_B_7(1E5E)
?
[Raw transfer]




PLP_A_3(1E5F)
?
[Raw transfer]




PZP_A_2(3MKJ)
?
[Raw transfer]




PLP_B_5(5DX5)
?
[Raw transfer]




NLE_A_2(3JWB)
?
[Raw transfer]




PLP_A_11(1IBJ)
METC_ARATH
[Raw transfer]




PLP_A_3(5DX5)
?
[Raw transfer]




PLP_A_11(1IBJ)
METC_ARATH
[Raw transfer]




PLP_A_3(5DX5)
?
[Raw transfer]




PLP_A_3(2CTZ)
?
[Raw transfer]




PLP_C_13(1IBJ)
METC_ARATH
[Raw transfer]




MPJ_A_2(3JWA)
?
[Raw transfer]




ECX_A_2(3JW9)
?
[Raw transfer]




EDO_A_22(1PFF)
?
[Raw transfer]




EDO_A_23(1PFF)
?
[Raw transfer]




108 HHSearch 82.9242%-108 - C1 -2RFV - ? -
30 PsiBlast_CBE 81.1747%-100 - C1 -4IY7 - ? -
103 HHSearch 81.1447% -98 - C1 -4IY7 - ? -
106 HHSearch 80.9743%-106 - C1 -1E5E 5.3 ?
35 PsiBlast_CBE 80.9242%-109 - C1 -3COG - CGL_HUMAN -
29 PsiBlast_CBE 80.6847%-102 - C1 -4IY7 - ? -
4 PsiBlast_PDB 80.5547% -98 - C1 -4IY7 - ? -
107 HHSearch 80.4846%-100 - C1 -1IBJ 4.0 METC_ARATH
5 PsiBlast_PDB 79.6347% -99 - C1 -4IYO - ? -
36 PsiBlast_CBE 79.3442%-108 - C1 -3COG - CGL_HUMAN -
1 PsiBlast_PDB 79.1951% -97 - C1 -4L0O - METB_HELPY -
102 HHSearch 79.1241%-111 - C1 -3COG - CGL_HUMAN -
13 PsiBlast_PDB 79.0241%-104 - C1 -2RFV - ? -
16 PsiBlast_PDB 78.8842%-102 - C1 -1E5E 5.3 ?
39 PsiBlast_CBE 78.6542%-109 - C1 -2NMP - CGL_HUMAN -
32 PsiBlast_CBE 78.6342%-102 - C1 -1E5F 3.6 ?
14 PsiBlast_PDB 78.5441%-106 - C1 -4P7Y - ? -
17 PsiBlast_PDB 78.5242%-101 - C1 -1E5F 3.6 ?
28 PsiBlast_CBE 78.3247% -99 - C1 -4IY7 - ? -
37 PsiBlast_CBE 78.2442%-116 - C1 -3COG - CGL_HUMAN -
33 PsiBlast_CBE 77.9042%-102 - C1 -1E5E 4.9 ?
2 PsiBlast_PDB 77.4347%-101 - C1 -1IBJ 4.0 METC_ARATH
10 PsiBlast_PDB 77.1241%-102 - C1 -3JW9 3.2 ?
7 PsiBlast_PDB 77.1141%-103 - C1 -4OMA 6.1 ?
11 PsiBlast_PDB 76.7441%-101 - C1 -3JWA 3.1 ?
12 PsiBlast_PDB 76.6441%-101 - C1 -3JWB 2.9 ?
105 HHSearch 76.0544% -96 - C1 -5DX5 4.1 ?
9 PsiBlast_PDB 75.9741%-102 - C1 -4HF8 5.9 ?
27 PsiBlast_CBE 75.4047% -97 - C1 -1IBJ 3.4 METC_ARATH
6 PsiBlast_PDB 75.1343% -95 - C1 -5DX5 4.1 ?
31 PsiBlast_CBE 75.0143% -91 - C1 -5DX5 3.8 ?
20 PsiBlast_PDB 73.9244%-112 - C1 -1PFF 2.9 ?
8 PsiBlast_PDB 73.9141%-102 - C1 -3MKJ 5.5 ?
117 HHSearch 60.1933% -87 - C1 -2CTZ 4.6 ?