@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu15610: (2016-06-24 )
MGKVYIVGAGPGDPDLLTIKALKAIEKADVILYDRLVNKEILQYAKEQADLIYCGKLPDFHTMKQETINRFLVKYAQKGKMVVRLKGGDPFVFGRGGEEAECLSENGIPFEIIPGITSGIAAAAYAGIPVTHRDAGSNVAFVTGHYKKEEDFEEKWKALATGIDTLVIYMGIKNVQQIERKLLENGRDGSTPAAFIHWGTTDKQKSVFCTVDTLSETVIKENITNPSLIVIGNVVNYHYKLEWFESELKKQDLSEAL

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAH_F_6(1PJS)
CYSG_SALTY
[Raw transfer]



SAH_D_4(1PJS)
CYSG_SALTY
[Raw transfer]



SAH_A_2(2YBO)
?
[Raw transfer]



SAH_A_2(2YBO)
?
[Raw transfer]



SAH_B_7(1PJQ)
CYSG_SALTY
[Raw transfer]



SAH_F_6(1V9A)
?
[Raw transfer]



SAH_D_4(1PJT)
CYSG_SALTY
[Raw transfer]



SAH_E_5(1V9A)
?
[Raw transfer]



SAH_E_5(1PJT)
CYSG_SALTY
[Raw transfer]



UP2_A_3(2YBQ)
?
[Raw transfer]
22 PsiBlast_CBE 81.9045%-136 - C1 -1PJQ 8.5 CYSG_SALTY
34 PsiBlast_CBE 81.5643%-141 - C1 -1S4D - SUMT_PSEDE -
23 PsiBlast_CBE 81.2445%-132 - C1 -1PJT 7.9 CYSG_SALTY
21 PsiBlast_CBE 80.8345%-135 - C1 -1PJS 8.2 CYSG_SALTY
31 PsiBlast_CBE 80.7243%-146 - C1 -1S4D - SUMT_PSEDE -
51 HHSearch 80.1747%-135 - C1 -1PJQ - CYSG_SALTY -
1 PsiBlast_PDB 79.7245%-139 - C1 -1PJQ - CYSG_SALTY -
49 HHSearch 79.6043%-142 - C1 -2YBO 7.7 ?
28 PsiBlast_CBE 79.4443%-135 - C1 -1S4D - SUMT_PSEDE -
32 PsiBlast_CBE 79.3843%-136 - C1 -1S4D - SUMT_PSEDE -
29 PsiBlast_CBE 78.8343%-146 - C1 -1S4D - SUMT_PSEDE -
33 PsiBlast_CBE 78.6043%-141 - C1 -1S4D - SUMT_PSEDE -
26 PsiBlast_CBE 78.5743%-135 - C1 -1S4D - SUMT_PSEDE -
3 PsiBlast_PDB 78.4345%-132 - C1 -1PJT 5.9 CYSG_SALTY
6 PsiBlast_PDB 78.3543%-139 - C1 -1S4D - SUMT_PSEDE -
30 PsiBlast_CBE 78.3143%-135 - C1 -1S4D - SUMT_PSEDE -
27 PsiBlast_CBE 77.9143%-144 - C1 -1S4D - SUMT_PSEDE -
48 HHSearch 77.7242%-134 - C1 -1S4D - SUMT_PSEDE -
4 PsiBlast_PDB 77.4043%-143 - C1 -2YBO 7.7 ?
24 PsiBlast_CBE 77.3643%-144 - C1 -1S4D - SUMT_PSEDE -
5 PsiBlast_PDB 77.0643%-147 - C1 -2YBQ 8.3 ?
2 PsiBlast_PDB 75.4645%-138 - C1 -1PJS 7.8 CYSG_SALTY
8 PsiBlast_PDB 69.3939%-124 - C1 -1V9A 7.6 ?
36 PsiBlast_CBE 68.5739%-127 - C1 -1V9A 7.7 ?